Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_C07
         (851 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   1.3  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    24   1.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   3.1  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   7.1  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   9.4  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +2

Query: 86  MIALVLCGLLAAVSAAPQYYHGSSHWPYHHYDPVQSLRSGKHVGHTFA 229
           MI L+    + AVSAAP  ++ S    Y H D V+S+ + + + + +A
Sbjct: 1   MIPLIAIAGILAVSAAPAEFYESR---YDHLD-VESILNNRRMVNYYA 44


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 92  ALVLCGLLAAVSAAPQYY 145
           A++LC  L AVSAA   Y
Sbjct: 6   AVILCAFLVAVSAAENKY 23


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 826 PPPPPPP 846
           PPPPPPP
Sbjct: 731 PPPPPPP 737



 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 829 PPPPPPP 849
           PPPPPPP
Sbjct: 731 PPPPPPP 737


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 454 NLPWDVNSEGSWV 492
           N  WDV+S GSW+
Sbjct: 187 NAWWDVHSTGSWL 199


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
 Frame = +1

Query: 541 PEDSKRPVAEPTETT---PTNVSREEMEFTT 624
           PE    P  +PT+TT   PT  S +  E +T
Sbjct: 393 PEPVPTPEPQPTQTTESEPTQASEQPTESST 423


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -1

Query: 851 GGGGGGGGGXXXGXXGG 801
           GGG GGG     G  GG
Sbjct: 92  GGGRGGGRDGDRGDGGG 108


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
 Frame = +2

Query: 155 SHWPYHHYDPVQSLRSG-KHVGHTFALVQPCQRN 253
           +HW     DP Q L  G    GH F LV   Q +
Sbjct: 238 THWILSGADP-QKLAIGIAFYGHAFTLVDASQHD 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,672
Number of Sequences: 336
Number of extensions: 4060
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)