Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_C04
(953 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 7e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 0.001
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.019
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.026
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.045
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.078
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 32 0.10
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 0.97
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 5.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 6.8
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.5 bits (88), Expect = 7e-04
Identities = 22/70 (31%), Positives = 22/70 (31%)
Frame = +2
Query: 482 PPPXPXPXPPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPPXPPXXPPXXXGPPXXGP 661
P P P PP P P G PP P PP P P PP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 662 PCPXPFPXXA 691
P P P P A
Sbjct: 476 PPPAPAPAPA 485
Score = 31.9 bits (69), Expect = 0.14
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +2
Query: 485 PPXPXPXPPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPP-XPPXXPPXXXGPPXXGP 661
PP P P P AP G P P PP PP PP P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 662 PCPXPFP 682
P P P
Sbjct: 448 PLPPSAP 454
Score = 31.5 bits (68), Expect = 0.18
Identities = 27/87 (31%), Positives = 27/87 (31%), Gaps = 9/87 (10%)
Frame = +2
Query: 443 PXXPRGXXVXXWGPPPXPXPXPPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPPXPPX 622
P PR PP PP P A TG PP P NPP PP
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP------PLSSSRAVSNPPAPPP 393
Query: 623 XPPXXXGP--PXXG-------PPCPXP 676
P P P G PP P P
Sbjct: 394 AIPGRSAPALPPLGNASRTSTPPVPTP 420
Score = 31.1 bits (67), Expect = 0.24
Identities = 24/89 (26%), Positives = 24/89 (26%), Gaps = 4/89 (4%)
Frame = +3
Query: 447 PPPGEXRXGXGAPPRXPXXXXXXXXXXXXXXXXPXPPGGXXGXPPX--PGXTPGTXLXXQ 620
P P G AP P PP PP P G
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Query: 621 XXPHXXXAPXX--GAPRAPXLSPXXPPPP 701
P AP G P AP L P P PP
Sbjct: 449 LPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +2
Query: 500 PXPPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPPXPPXXPPXXXGPPXXGPPCPXP 676
P PP P A + PP G PP + P PP PP P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP--PPLSSSRAVSNPPAPPP 393
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 443 PXXPRGXXVXXWGPPPXPXPXPPXXPAPXA 532
P P G PP P P P PAP A
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAPAPAA 486
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.1 bits (87), Expect = 0.001
Identities = 24/67 (35%), Positives = 24/67 (35%)
Frame = +2
Query: 482 PPPXPXPXPPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPPXPPXXPPXXXGPPXXGP 661
P P P P P PAP G PP PP G G PP PP P G
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPP------PPGVAGA-GPPPPPPPPPAVSAGGSRYYA 794
Query: 662 PCPXPFP 682
P P P
Sbjct: 795 PAPQAEP 801
Score = 34.7 bits (76), Expect = 0.019
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = +2
Query: 482 PPPXPXPXPPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPPXPPXXPP 631
PPP P PAP P GG PP G G P PP PP
Sbjct: 734 PPPPAVIVPTPAPAPIP-VPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.3 bits (65), Expect = 0.42
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 442 PXXPPGXXGXXXGPPPXPPP 501
P PPG G PPP PPP
Sbjct: 764 PPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.55
Identities = 21/61 (34%), Positives = 21/61 (34%)
Frame = +2
Query: 488 PXPXPXPPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPPXPPXXPPXXXGPPXXGPPC 667
P P P P P PP P GG P PP PP GPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPA------PIMGGPPP-PPPPPGVA--GAGPPPPPPPP 782
Query: 668 P 670
P
Sbjct: 783 P 783
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/68 (33%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Frame = +2
Query: 479 GPPPXPXPX--PPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPPXPPXXPPXXXGPPX 652
G PP P P P PAP +G P G P P P PP PP
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP--PPS 1214
Query: 653 XGPPCPXP 676
PP P P
Sbjct: 1215 TAPPVPTP 1222
Score = 36.7 bits (81), Expect = 0.005
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +2
Query: 479 GPPPXPXPX--PPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPPXPPXXPPXXXGPPX 652
G PP P P P PAP P P G P P PP PP
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP--PPS 1195
Query: 653 XGPPCPXP 676
PP P P
Sbjct: 1196 EAPPVPKP 1203
Score = 33.5 bits (73), Expect = 0.045
Identities = 26/87 (29%), Positives = 28/87 (32%), Gaps = 9/87 (10%)
Frame = +2
Query: 443 PXXPRGXXVXXWGPPPXPXPXP--PXXPAPXA-----GXTGXXP-PXGGXRXPPXXGGXP 598
P P+ PPP P P P PAP +G P P PP
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 599 GNPPXP-PXXPPXXXGPPXXGPPCPXP 676
PP P P P P PP P P
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 32.7 bits (71), Expect = 0.078
Identities = 22/73 (30%), Positives = 22/73 (30%), Gaps = 5/73 (6%)
Frame = +2
Query: 479 GPPPXPXPXP-PXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNP----PXPPXXPPXXXG 643
G PP P P P P P G PP P G P P PP P
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEA 1246
Query: 644 PPXXGPPCPXPFP 682
P P P P
Sbjct: 1247 PSVSTPRSSVPSP 1259
Score = 31.9 bits (69), Expect = 0.14
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 3/69 (4%)
Frame = +2
Query: 479 GPPPXPXPX--PPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPPXP-PXXPPXXXGPP 649
G PP P P P P P P G PP PP P P P P
Sbjct: 1090 GIPPVPKPSVAAPPVPKPSVAVPPVPAPSGA---PPVPKPSVAAPPVPVPSGAPPVPKPS 1146
Query: 650 XXGPPCPXP 676
PP P P
Sbjct: 1147 VAAPPVPAP 1155
Score = 31.5 bits (68), Expect = 0.18
Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
Frame = +2
Query: 482 PPPXPXPXPPXXPAPXAGXTGXXPPXGGXRXP-PXXGGXPGNPPXP-PXXPPXXXGPPXX 655
P P P PP P +G PP P G PP P P P P
Sbjct: 1042 PVPIPTSTPP-VPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 656 GPPCPXP 676
PP P P
Sbjct: 1101 APPVPKP 1107
Score = 31.5 bits (68), Expect = 0.18
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +2
Query: 479 GPPPXPXPXPPXXPAPXAGXTGXXPPXGGXRXP-PXXGGXPGNPPXPPXXPPXXXGPPXX 655
G PP P P P P P P P G P P P P P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP-PVPKPSVAAPPVPAPSSG 1177
Query: 656 GPPCPXP 676
PP P P
Sbjct: 1178 IPPVPKP 1184
Score = 30.3 bits (65), Expect = 0.42
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +2
Query: 482 PPPXPXPXPPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPPXPPXXPPXXXGPPXXGP 661
P P P P P P P G PP P P P P P P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP--VPTPSAGLPPVPVPTAKAP 1237
Query: 662 PCPXP 676
P P P
Sbjct: 1238 PVPAP 1242
Score = 29.5 bits (63), Expect = 0.73
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Frame = +2
Query: 485 PPXPXPXPPXXPAPXAGXTGXXPPXGGXRXP-PXXGGXPGNPPXPPXXPPXXXGPPXXGP 661
PP P P P P P P P G P P PP P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP--APSGAP 1159
Query: 662 PCPXP 676
P P P
Sbjct: 1160 PVPKP 1164
Score = 28.3 bits (60), Expect = 1.7
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 5/69 (7%)
Frame = +2
Query: 485 PPXPXPXPPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPPXPPXXP-PXXXGP----P 649
PP P P P P P PP G P PP P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTST--PPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Query: 650 XXGPPCPXP 676
PP P P
Sbjct: 1080 SGAPPVPAP 1088
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.7 bits (76), Expect = 0.019
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 596 PGNPPXPPXXPPXXXGPPXXGPPCPXP 676
PGNPP PP PP PP PP P P
Sbjct: 6 PGNPPPPP--PPPGFEPPSQPPPPPPP 30
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.026
Identities = 23/64 (35%), Positives = 24/64 (37%)
Frame = +2
Query: 485 PPXPXPXPPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPPXPPXXPPXXXGPPXXGPP 664
P P PP P A PP PP P + P PP PP GPP PP
Sbjct: 1683 PAHPVSTPPVRPQSAA------PPQMSAPTPPPP---PMSVPPPPSAPPMPAGPP-SAPP 1732
Query: 665 CPXP 676
P P
Sbjct: 1733 PPLP 1736
Score = 30.7 bits (66), Expect = 0.32
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +2
Query: 551 PPXGGXRXPPXXGGXPGNPPXPPXXPPXXXGPP-XXGPPCPXPFPXXA 691
PP P P PP P PP PP GPP P P A
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPA 1737
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 482 PPPXPXPXPPXXPAPXAGXTGXXPP 556
PPP P PP P AG PP
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.5 bits (73), Expect = 0.045
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = +2
Query: 506 PPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGN-PPXPPXXPPXXXG-PPXXGPPCPXPF 679
PP PAP + PP P P + PP P PP PP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 680 PXXA 691
P A
Sbjct: 184 PPSA 187
Score = 32.7 bits (71), Expect = 0.078
Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = +2
Query: 443 PXXPRGXXVXXWGPPPXPXPXPPXXPAPXAGXTGXXPPXGGXRXPPXXGGXP-GNPPXPP 619
P P+ PP P PP PA PP PP P +PP P
Sbjct: 130 PPTPQSELRPPTSAPPRP-SIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Query: 620 XXPPXXXGPPXXGPPCP 670
P P PP P
Sbjct: 189 SLPSAVPPMPPKVPPPP 205
Score = 30.7 bits (66), Expect = 0.32
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +2
Query: 485 PPXPXPXPPXXPAPXAGXTGXXPPXGGXRXP-PXXGGXPGNPPXPPXXPPXXXGPPXXGP 661
PP P P P P PP P P P P P PP P P
Sbjct: 139 PPTSAPPRPSIPPPSPASA---PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVP 195
Query: 662 PCPXPFP 682
P P P
Sbjct: 196 PMPPKVP 202
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +2
Query: 485 PPXPXPXPPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPPXPPXXPPXXXGPPXXGPP 664
P P P P A PP PP P P P PP P PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP--PPAQPAAPVKSPP 185
Query: 665 CPXPFP 682
P
Sbjct: 186 SAPSLP 191
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.7 bits (71), Expect = 0.078
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = -2
Query: 952 GPGGGGPXXXGGXGEXGPGXPXGGXGGAGXPG 857
GPGG G GG G GPG GG GG G PG
Sbjct: 243 GPGGFG-GGLGGFG-GGPGGFGGGPGGHGGPG 272
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -2
Query: 952 GPGGGGPXXXGGXGEXGPGXPXGGXGGAGXPGXXXXGAG 836
G GGG GG G G G P G GG G G G G
Sbjct: 225 GFGGGPGGFEGGPGGFG-GGPGGFGGGLGGFGGGPGGFG 262
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -2
Query: 952 GPGGGGPXXXGGXGEXGPGXPXGGXGGAGXPG 857
G GGG GG G GP GG GG G G
Sbjct: 184 GHNGGGFGGFGG-GSGGPPPGPGGFGGFGGFG 214
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 32.3 bits (70), Expect = 0.10
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 482 PPPXPXPXPPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPPXPP 619
PPP P P P A T PP G G PG P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVP 1927
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.1 bits (62), Expect = 0.97
Identities = 25/67 (37%), Positives = 25/67 (37%), Gaps = 3/67 (4%)
Frame = +2
Query: 485 PPXPXPXPPXXPAPXAGXTGXXPPXGGXRXPPXXG--GXPG-NPPXPPXXPPXXXGPPXX 655
P P P AP T PP G PP G G P N PP PP PP
Sbjct: 479 PSQNAPFIPGTSAPLPPTT-FAPP--GVPLPPIPGAPGMPNLNMSQPPMVPPGMALPP-- 533
Query: 656 GPPCPXP 676
G P P P
Sbjct: 534 GMPAPFP 540
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 5.1
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +2
Query: 482 PPPXPXPXPPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNPPXPPXXPPXXXGPP 649
P P P P PP P + T P R G PP PP P PP
Sbjct: 234 PLPAPPPPPPPTLPPQSTNTSQLPMPS--RNVNNLGSQVNIPP-PPATPSQPPRPP 286
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 6.8
Identities = 22/76 (28%), Positives = 22/76 (28%), Gaps = 9/76 (11%)
Frame = +2
Query: 482 PPPXPX-------PXPPXXPAPXAGXTGXXPPXGGXRXPPXXGGXPGNP--PXPPXXPPX 634
PPP P P P P G T P G R PP NP P P P
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVA 967
Query: 635 XXGPPXXGPPCPXPFP 682
P P P
Sbjct: 968 AASRISSSPNMPPSNP 983
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,940,678
Number of Sequences: 5004
Number of extensions: 24541
Number of successful extensions: 239
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 487313384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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