Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_C03
         (864 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0096 - 5248369-5248479,5248562-5248604,5249093-5249178,525...    30   2.7  
11_03_0188 - 11338013-11338976,11339843-11340183                       28   8.4  
09_02_0615 - 11251869-11252832,11253699-11254039                       28   8.4  
06_03_0490 - 21375400-21376363,21377230-21377570                       28   8.4  
06_02_0143 - 12266120-12267083,12267950-12268290                       28   8.4  
06_02_0141 + 12259098-12259438,12260305-12261268                       28   8.4  
03_02_0921 + 12414932-12416569                                         28   8.4  
02_04_0118 + 19924184-19924524,19925391-19926354                       28   8.4  

>10_02_0096 -
           5248369-5248479,5248562-5248604,5249093-5249178,
           5250089-5250153,5252539-5252747,5253077-5253188,
           5253271-5253322,5254593-5254685,5254997-5255146,
           5255223-5255327,5255858-5255891,5256145-5256281,
           5257691-5257819,5257899-5257977,5258081-5258156,
           5258981-5259070,5259181-5259259,5259397-5259431,
           5260722-5260811,5260913-5261027
          Length = 629

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +3

Query: 174 NKQLYDSVISGDYDHAASIAKRLHTNNVS 260
           +++ +D++++GD+D A    K LHTN  S
Sbjct: 34  SREFHDALVAGDFDRARVHPKFLHTNATS 62


>11_03_0188 - 11338013-11338976,11339843-11340183
          Length = 434

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = -2

Query: 392 K*SELYWKVIGDDFSRSGSPQSVRKIDEI 306
           K  + +WK + D+F+R G+ +  R+I+++
Sbjct: 211 KKGDTFWKEVTDEFNRKGNGKRTREINQL 239


>09_02_0615 - 11251869-11252832,11253699-11254039
          Length = 434

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = -2

Query: 392 K*SELYWKVIGDDFSRSGSPQSVRKIDEI 306
           K  + +WK + D+F+R G+ +  R+I+++
Sbjct: 211 KKGDTFWKEVTDEFNRKGNGKRTREINQL 239


>06_03_0490 - 21375400-21376363,21377230-21377570
          Length = 434

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = -2

Query: 392 K*SELYWKVIGDDFSRSGSPQSVRKIDEI 306
           K  + +WK + D+F+R G+ +  R+I+++
Sbjct: 211 KKGDTFWKEVTDEFNRKGNGKRTREINQL 239


>06_02_0143 - 12266120-12267083,12267950-12268290
          Length = 434

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = -2

Query: 392 K*SELYWKVIGDDFSRSGSPQSVRKIDEI 306
           K  + +WK + D+F+R G+ +  R+I+++
Sbjct: 211 KKGDTFWKEVTDEFNRKGNGKRTREINQL 239


>06_02_0141 + 12259098-12259438,12260305-12261268
          Length = 434

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = -2

Query: 392 K*SELYWKVIGDDFSRSGSPQSVRKIDEI 306
           K  + +WK + D+F+R G+ +  R+I+++
Sbjct: 211 KKGDTFWKEVTDEFNRKGNGKRTREINQL 239


>03_02_0921 + 12414932-12416569
          Length = 545

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 19/64 (29%), Positives = 33/64 (51%)
 Frame = +3

Query: 69  RD*LEPIQDIKTAKEMKKLVLIALLFFAQTISAEYNKQLYDSVISGDYDHAASIAKRLHT 248
           RD  + I  +   + +K L L+     A T+S +YN  L    ++GD+D A ++ + L  
Sbjct: 98  RDCAKRIMGLPVEERVKVLDLLQRDDGALTVS-DYNDILSALAMAGDHDSAVALFRALRP 156

Query: 249 NNVS 260
           N V+
Sbjct: 157 NGVT 160


>02_04_0118 + 19924184-19924524,19925391-19926354
          Length = 434

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = -2

Query: 392 K*SELYWKVIGDDFSRSGSPQSVRKIDEI 306
           K  + +WK + D+F+R G+ +  R+I+++
Sbjct: 211 KKGDTFWKEVTDEFNRKGNGKRTREINQL 239


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,284,362
Number of Sequences: 37544
Number of extensions: 288990
Number of successful extensions: 923
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)