Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_C03
         (864 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011012-1|AAR30172.1|  315|Drosophila melanogaster SD15476p pro...    32   0.89 
AY089624-1|AAL90362.1|  394|Drosophila melanogaster RE36666p pro...    32   0.89 
AY070866-1|AAL48488.1|  377|Drosophila melanogaster HL02811p pro...    32   0.89 
AE014297-33|AAN13337.1|  315|Drosophila melanogaster CG1092-PB, ...    32   0.89 
AE014297-32|AAF52155.2|  400|Drosophila melanogaster CG1092-PA, ...    32   0.89 

>BT011012-1|AAR30172.1|  315|Drosophila melanogaster SD15476p
           protein.
          Length = 315

 Score = 32.3 bits (70), Expect = 0.89
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
 Frame = +2

Query: 239 ATYKQRQRTSRNYFEV-DIRQNSQSRRFFVQTVDYRIER-NHHR*LSNTVPIILQR 400
           ATYKQ+ +T R YF   D+ +  +  R + ++ ++ +     HR L++T  + +QR
Sbjct: 99  ATYKQKFKTPRVYFHARDLSREYKDLRIYRESYEHNVRNLEQHRKLNSTYELGVQR 154


>AY089624-1|AAL90362.1|  394|Drosophila melanogaster RE36666p
           protein.
          Length = 394

 Score = 32.3 bits (70), Expect = 0.89
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
 Frame = +2

Query: 239 ATYKQRQRTSRNYFEV-DIRQNSQSRRFFVQTVDYRIER-NHHR*LSNTVPIILQR 400
           ATYKQ+ +T R YF   D+ +  +  R + ++ ++ +     HR L++T  + +QR
Sbjct: 178 ATYKQKFKTPRVYFHARDLSREYKDLRIYRESYEHNVRNLEQHRKLNSTYELGVQR 233


>AY070866-1|AAL48488.1|  377|Drosophila melanogaster HL02811p
           protein.
          Length = 377

 Score = 32.3 bits (70), Expect = 0.89
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
 Frame = +2

Query: 239 ATYKQRQRTSRNYFEV-DIRQNSQSRRFFVQTVDYRIER-NHHR*LSNTVPIILQR 400
           ATYKQ+ +T R YF   D+ +  +  R + ++ ++ +     HR L++T  + +QR
Sbjct: 161 ATYKQKFKTPRVYFHARDLSREYKDLRIYRESYEHNVRNLEQHRKLNSTYELGVQR 216


>AE014297-33|AAN13337.1|  315|Drosophila melanogaster CG1092-PB,
           isoform B protein.
          Length = 315

 Score = 32.3 bits (70), Expect = 0.89
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
 Frame = +2

Query: 239 ATYKQRQRTSRNYFEV-DIRQNSQSRRFFVQTVDYRIER-NHHR*LSNTVPIILQR 400
           ATYKQ+ +T R YF   D+ +  +  R + ++ ++ +     HR L++T  + +QR
Sbjct: 99  ATYKQKFKTPRVYFHARDLSREYKDLRIYRESYEHNVRNLEQHRKLNSTYELGVQR 154


>AE014297-32|AAF52155.2|  400|Drosophila melanogaster CG1092-PA,
           isoform A protein.
          Length = 400

 Score = 32.3 bits (70), Expect = 0.89
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
 Frame = +2

Query: 239 ATYKQRQRTSRNYFEV-DIRQNSQSRRFFVQTVDYRIER-NHHR*LSNTVPIILQR 400
           ATYKQ+ +T R YF   D+ +  +  R + ++ ++ +     HR L++T  + +QR
Sbjct: 184 ATYKQKFKTPRVYFHARDLSREYKDLRIYRESYEHNVRNLEQHRKLNSTYELGVQR 239


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,045,065
Number of Sequences: 53049
Number of extensions: 498823
Number of successful extensions: 1488
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1479
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)