Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_C02
         (877 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.59 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    25   1.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   4.2  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   4.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   7.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   7.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   7.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   7.3  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 634 APPPPXXPLXXPPPXXXPXPXTPXTXSXXP 723
           +P PP      P P   P P +P + S  P
Sbjct: 44  SPAPPEEEAASPTPGDVPTPSSPRSISEDP 73


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 3/37 (8%)
 Frame = +1

Query: 670 PPXXXPXPXTPXTX---SXXPPFXXXPPPPSPXPXPP 771
           P    P P  P T    +  PP    PP P P   PP
Sbjct: 155 PSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 159 KKCFICEICDAIALFVTIISCNKQVN 236
           K C +C+  + I  F+ II C  Q N
Sbjct: 522 KLCDVCDSVNRIFGFIIIIGCLIQFN 547


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 182 NFTNKAFFSLH 150
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 182 NFTNKAFFSLH 150
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 540 APXPLXXPPPKSXXPXXXXXNPPPDH 617
           +P P+  P   S  P     N PPDH
Sbjct: 266 SPYPMQRPKSASLSPPPHVYN-PPDH 290


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 739 PPPPSPXPXPP 771
           PPPP P   PP
Sbjct: 736 PPPPHPHHQPP 746


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 739 PPPPSPXPXPP 771
           PPPP P   PP
Sbjct: 628 PPPPHPHHQPP 638


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/35 (28%), Positives = 12/35 (34%)
 Frame = +1

Query: 571 NPPLXLXXAXTPHPTXXXPPXAPPPPXXPLXXPPP 675
           +P + L     PH     P    PP   P    PP
Sbjct: 51  DPSVGLRQGIPPHHYGGPPSGGQPPQGMPYPRFPP 85


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +3

Query: 192 IALFVTIISCNKQVNNNNCIHFMFQ 266
           +A+F+    C++    +NC+   FQ
Sbjct: 327 LAIFILYFICDEAHYASNCLRVQFQ 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,174
Number of Sequences: 336
Number of extensions: 4010
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)