Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_B22
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81077-5|CAB03065.1| 151|Caenorhabditis elegans Hypothetical pr... 165 4e-41
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.051
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.051
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.051
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.36
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.36
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.47
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.47
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 4.4
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.8
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z81077-5|CAB03065.1| 151|Caenorhabditis elegans Hypothetical
protein F36A2.6 protein.
Length = 151
Score = 165 bits (401), Expect = 4e-41
Identities = 77/120 (64%), Positives = 93/120 (77%)
Frame = +3
Query: 159 LNMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMII 338
L+M EQ +L+ GLKRK +AL+ K+++AKK A EKP VKTHLR+MII
Sbjct: 32 LDMSREQFTKLLPCRMRRRLDRGLKRKHLALIAKVQKAKKAAGVLEKPATVKTHLRDMII 91
Query: 339 VPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRXGIGATHSSRFIPLK 518
+PE+VG ++GIYNGK FNQ EIKPEMIG YLGEF+++YKPVKHGR GIGATHSSRFIPLK
Sbjct: 92 LPELVGGVIGIYNGKVFNQTEIKPEMIGFYLGEFAISYKPVKHGRPGIGATHSSRFIPLK 151
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 68 TRNMAEVDETLKKKRIFRKFTYRGVDLDQLLEYAQ 172
T++ A + E LKKKR FRKF YRGVDLDQLL+ ++
Sbjct: 3 TQDDAHLAE-LKKKRTFRKFMYRGVDLDQLLDMSR 36
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.051
Identities = 20/66 (30%), Positives = 23/66 (34%)
Frame = +1
Query: 682 PGAPXXPPLXGGVIRPPPXXKXFXXSXPPPPXXXPXXXXXLXSXXXXXPXXPXXGPXXTP 861
P P PP+ GG PPP + PPP P + P P G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG--GPPPPPPPPGGCPPP 771
Query: 862 XXPTPP 879
P PP
Sbjct: 772 PPPPPP 777
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/65 (29%), Positives = 23/65 (35%)
Frame = +1
Query: 685 GAPXXPPLXGGVIRPPPXXKXFXXSXPPPPXXXPXXXXXLXSXXXXXPXXPXXGPXXTPX 864
G+ PP+ GG PPP PPPP P + P P P +
Sbjct: 702 GSSALPPITGGP-PPPPGLPPITGGPPPPP---PPGGLPPITGGPPPPPPPGGLPPISGG 757
Query: 865 XPTPP 879
P PP
Sbjct: 758 PPPPP 762
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 685 GAPXXPPLXGGVIRPPPXXK--XFXXSXPPPP 774
G P PP GG PPP F PPPP
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.051
Identities = 20/66 (30%), Positives = 23/66 (34%)
Frame = +1
Query: 682 PGAPXXPPLXGGVIRPPPXXKXFXXSXPPPPXXXPXXXXXLXSXXXXXPXXPXXGPXXTP 861
P P PP+ GG PPP + PPP P + P P G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG--GPPPPPPPPGGCPPP 771
Query: 862 XXPTPP 879
P PP
Sbjct: 772 PPPPPP 777
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/65 (29%), Positives = 23/65 (35%)
Frame = +1
Query: 685 GAPXXPPLXGGVIRPPPXXKXFXXSXPPPPXXXPXXXXXLXSXXXXXPXXPXXGPXXTPX 864
G+ PP+ GG PPP PPPP P + P P P +
Sbjct: 702 GSSALPPITGGP-PPPPGLPPITGGPPPPP---PPGGLPPITGGPPPPPPPGGLPPISGG 757
Query: 865 XPTPP 879
P PP
Sbjct: 758 PPPPP 762
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 685 GAPXXPPLXGGVIRPPPXXK--XFXXSXPPPP 774
G P PP GG PPP F PPPP
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.051
Identities = 20/66 (30%), Positives = 23/66 (34%)
Frame = +1
Query: 682 PGAPXXPPLXGGVIRPPPXXKXFXXSXPPPPXXXPXXXXXLXSXXXXXPXXPXXGPXXTP 861
P P PP+ GG PPP + PPP P + P P G P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG--GPPPPPPPPGGCPPP 354
Query: 862 XXPTPP 879
P PP
Sbjct: 355 PPPPPP 360
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/65 (29%), Positives = 23/65 (35%)
Frame = +1
Query: 685 GAPXXPPLXGGVIRPPPXXKXFXXSXPPPPXXXPXXXXXLXSXXXXXPXXPXXGPXXTPX 864
G+ PP+ GG PPP PPPP P + P P P +
Sbjct: 285 GSSALPPITGGP-PPPPGLPPITGGPPPPP---PPGGLPPITGGPPPPPPPGGLPPISGG 340
Query: 865 XPTPP 879
P PP
Sbjct: 341 PPPPP 345
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 685 GAPXXPPLXGGVIRPPPXXK--XFXXSXPPPP 774
G P PP GG PPP F PPPP
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +1
Query: 682 PGAPXXPPLXGGVIRPPPXXKXFXXSXPPPPXXXPXXXXXLXSXXXXXPXXPXXGPXXTP 861
P P PP G RPPP PPPP P GP
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 331
Query: 862 XXPTPP 879
P PP
Sbjct: 332 GMPPPP 337
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/89 (24%), Positives = 26/89 (29%), Gaps = 2/89 (2%)
Frame = +1
Query: 616 PPXXXXXXXXXPXXXXXXXXKXPGAPXXPPLXGGVIRPPPXXKXFXXS-XPPPPXXXPXX 792
PP P P + PP GG+ PPP + PPPP P
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 358
Query: 793 XXXL-XSXXXXXPXXPXXGPXXTPXXPTP 876
+ P P G P P P
Sbjct: 359 GPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +1
Query: 682 PGAPXXPPLXGGVIRPPPXXKXFXXSXPPPPXXXPXXXXXLXSXXXXXPXXPXXGPXXTP 861
P P PP G RPPP PPPP P GP
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 341
Query: 862 XXPTPP 879
P PP
Sbjct: 342 GMPPPP 347
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/89 (24%), Positives = 26/89 (29%), Gaps = 2/89 (2%)
Frame = +1
Query: 616 PPXXXXXXXXXPXXXXXXXXKXPGAPXXPPLXGGVIRPPPXXKXFXXS-XPPPPXXXPXX 792
PP P P + PP GG+ PPP + PPPP P
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 368
Query: 793 XXXL-XSXXXXXPXXPXXGPXXTPXXPTP 876
+ P P G P P P
Sbjct: 369 GPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 685 GAPXXPPLXGGVIRPPPXXKXFXXSXPPPP 774
G P PP+ GG+ PPP F PPPP
Sbjct: 93 GIPPPPPMMGGIPPPPP---MFGAPPPPPP 119
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +1
Query: 682 PGAPXXPPLXGGVIRPPPXXKXFXXSXPPPPXXXPXXXXXLXSXXXXXPXXPXXGPXXTP 861
P PP G I PPP F PPPP P P G P
Sbjct: 70 PNGFIPPPPGPGGIPPPP--PMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAP 127
Query: 862 XXPTP 876
P P
Sbjct: 128 QPPRP 132
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 32.3 bits (70), Expect = 0.47
Identities = 21/67 (31%), Positives = 21/67 (31%)
Frame = -1
Query: 881 GGGVGWXGVXXGPXXGXXGXXXXXEXRXXXXXGFXXGGGGXDXXXXXXXGGGRITPPXKG 702
GGG GW G G G G GGGG GGGR G
Sbjct: 59 GGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGG 118
Query: 701 GXXGAPG 681
G G G
Sbjct: 119 GGRGGGG 125
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 724 RPPPXXKXFXXSXPPPPXXXPXXXXXLXSXXXXXPXXPXXGPXXTPXXPT 873
RPPP K + PPPP P P P G P PT
Sbjct: 63 RPPPPPKG-TGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPT 111
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Frame = -1
Query: 785 GFXXGGGGXDXXXXXXXGGGRIT------PPXKGGXXGAPG 681
G+ GGGG GGG T PP GG G PG
Sbjct: 92 GYGAGGGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGKPG 132
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/67 (26%), Positives = 22/67 (32%)
Frame = -1
Query: 881 GGGVGWXGVXXGPXXGXXGXXXXXEXRXXXXXGFXXGGGGXDXXXXXXXGGGRITPPXKG 702
GG +G+ G G G + GF G G GG R PP +G
Sbjct: 513 GGDMGYGAYGGGYGGGYGGPGAYGDFGAYGGGGFRGGMRGSPRGGMGGGGGFRGGPPGRG 572
Query: 701 GXXGAPG 681
G G
Sbjct: 573 GMANRRG 579
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,348,540
Number of Sequences: 27780
Number of extensions: 293756
Number of successful extensions: 1013
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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