Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_B18
(746 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 60 2e-09
03_01_0547 + 4093196-4093657,4094267-4095148 60 2e-09
03_01_0544 + 4082528-4082989,4083585-4084466 60 2e-09
03_01_0543 + 4076981-4077442,4078145-4079026 60 2e-09
02_04_0462 + 23131433-23132836 37 0.020
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 36 0.034
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 36 0.034
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 34 0.14
07_03_1136 + 24218601-24218734,24218769-24219906 30 1.7
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 29 3.0
10_08_0136 - 15122420-15122469,15123845-15124334,15124822-151249... 29 3.9
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 26 4.7
11_02_0051 + 7776312-7780228,7780627-7780695,7781920-7781979,778... 28 9.1
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 9.1
04_01_0103 + 1082077-1082167,1083037-1085477 28 9.1
02_04_0017 + 18937774-18937864,18938505-18940945 28 9.1
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 28 9.1
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 124 REKTHINIVVIGHVDSGKSTTTGHLIYNV 210
+EKTHINIVVIGHVDSGKSTTTGHLIY +
Sbjct: 3 KEKTHINIVVIGHVDSGKSTTTGHLIYKL 31
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 210 GGIDXRTIXXFXXEXQENG*XSFXYAW 290
GGID R I F E E SF YAW
Sbjct: 32 GGIDKRVIERFEKEAAEMNKRSFKYAW 58
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 124 REKTHINIVVIGHVDSGKSTTTGHLIYNV 210
+EKTHINIVVIGHVDSGKSTTTGHLIY +
Sbjct: 3 KEKTHINIVVIGHVDSGKSTTTGHLIYKL 31
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 210 GGIDXRTIXXFXXEXQENG*XSFXYAW 290
GGID R I F E E SF YAW
Sbjct: 32 GGIDKRVIERFEKEAAEMNKRSFKYAW 58
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 124 REKTHINIVVIGHVDSGKSTTTGHLIYNV 210
+EKTHINIVVIGHVDSGKSTTTGHLIY +
Sbjct: 3 KEKTHINIVVIGHVDSGKSTTTGHLIYKL 31
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 210 GGIDXRTIXXFXXEXQENG*XSFXYAW 290
GGID R I F E E SF YAW
Sbjct: 32 GGIDKRVIERFEKEAAEMNKRSFKYAW 58
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 124 REKTHINIVVIGHVDSGKSTTTGHLIYNV 210
+EKTHINIVVIGHVDSGKSTTTGHLIY +
Sbjct: 3 KEKTHINIVVIGHVDSGKSTTTGHLIYKL 31
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 210 GGIDXRTIXXFXXEXQENG*XSFXYAW 290
GGID R I F E E SF YAW
Sbjct: 32 GGIDKRVIERFEKEAAEMNKRSFKYAW 58
>02_04_0462 + 23131433-23132836
Length = 467
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 115 KWAREKTHINIVVIGHVDSGKSTTTGHL 198
K+ R K H+NI IGHVD GK+T T L
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAAL 90
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 35.9 bits (79), Expect = 0.034
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +1
Query: 133 THINIVVIGHVDSGKSTTTGHLIY 204
+ +N+ ++GHVDSGKST +G L++
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLH 269
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 35.9 bits (79), Expect = 0.034
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +1
Query: 133 THINIVVIGHVDSGKSTTTGHLIY 204
+ +N+ ++GHVDSGKST +G L++
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLH 269
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 118 WAREKTHINIVVIGHVDSGKSTTT 189
+ R K H+N+ IGHVD GK+T T
Sbjct: 61 FTRTKPHVNVGTIGHVDHGKTTLT 84
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/52 (38%), Positives = 22/52 (42%)
Frame = -2
Query: 595 PPGGGKXXXXXFXPGGGXLFXXXNPXXIFPGXXXVFGGGXXPQNPXGGGSXG 440
PPGGG+ PGGG P PG GGG + P GGG G
Sbjct: 160 PPGGGRGGALGRPPGGGG--GGGGPGRA-PGGGG--GGGGPGRAPGGGGGGG 206
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/56 (37%), Positives = 22/56 (39%)
Frame = -2
Query: 607 GXXXPPGGGKXXXXXFXPGGGXLFXXXNPXXIFPGXXXVFGGGXXPQNPXGGGSXG 440
G P GGG PGGG P + PG GGG P P GGG G
Sbjct: 96 GAPGPLGGGGARP----PGGGG---GGGPPSLPPGAGG--GGGARPPAPGGGGGGG 142
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +1
Query: 136 HINIVVIGHVDSGKSTTTGHLIY 204
HI+ V++ H+D+GK+TTT ++Y
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLY 126
>10_08_0136 -
15122420-15122469,15123845-15124334,15124822-15124935,
15125022-15125303,15125422-15125591,15125670-15125757,
15126128-15126173,15126254-15126336,15126595-15126694,
15127002-15127081,15127200-15127283,15127373-15127531,
15128617-15128772,15129634-15130197
Length = 821
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 67 SLSRILHAVCNPVTNQKWAREKTH 138
SL +LH C N+++ARE TH
Sbjct: 332 SLEHLLHHFCGVTANKEYAREDTH 355
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 25.8 bits (54), Expect(2) = 4.7
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -2
Query: 607 GXXXPPGGGKXXXXXFXPGGGXLFXXXNPXXIFPGXXXVFGGG 479
G P GGG F GG F P G FGGG
Sbjct: 4 GGGNPRGGGGGGPRGFGGGGPRGFGGGGPRGFGGGGPRGFGGG 46
Score = 21.4 bits (43), Expect(2) = 4.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 487 GGGXXPQNPXGGGSXGKNFF 428
GGG GGG GK F+
Sbjct: 86 GGGLGSGVSGGGGGLGKRFW 105
>11_02_0051 +
7776312-7780228,7780627-7780695,7781920-7781979,
7782225-7782324,7782720-7782801,7782928-7782940,
7783621-7783681
Length = 1433
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 79 ILHAVCNPVTNQKWAREKTHINIVVIGHVDSGKSTTTGHLIYN 207
I+ +CNP + + E+ + ++GH +GK TT IYN
Sbjct: 186 IISFLCNP-DDTNTSGERNYCTSAIVGHGGAGK-TTLAQYIYN 226
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 130 KTHINIVVIGHVDSG 174
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 142 NIVVIGHVDSGKSTTTGHLI 201
N+ VI HVD GKST T L+
Sbjct: 21 NMSVIAHVDHGKSTLTDSLV 40
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 142 NIVVIGHVDSGKSTTTGHLI 201
N+ VI HVD GKST T L+
Sbjct: 21 NMSVIAHVDHGKSTLTDSLV 40
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 142 NIVVIGHVDSGKSTTTGHLI 201
N+ VI HVD GKST T L+
Sbjct: 21 NMSVIAHVDHGKSTLTDSLV 40
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,062,558
Number of Sequences: 37544
Number of extensions: 336199
Number of successful extensions: 419
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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