Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_B18
         (746 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    57   2e-10
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    57   2e-10
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    25   0.57 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   0.75 
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    22   5.3  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   5.3  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   5.3  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   5.3  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 57.2 bits (132), Expect = 2e-10
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +1

Query: 124 REKTHINIVVIGHVDSGKSTTTGHLIY 204
           +EK HINIVVIGHVDSGKSTTTGHLIY
Sbjct: 3   KEKIHINIVVIGHVDSGKSTTTGHLIY 29



 Score = 40.7 bits (91), Expect = 1e-05
 Identities = 18/29 (62%), Positives = 19/29 (65%)
 Frame = +3

Query: 204 QCGGIDXRTIXXFXXEXQENG*XSFXYAW 290
           +CGGID RTI  F  E QE G  SF YAW
Sbjct: 30  KCGGIDKRTIEKFEKEAQEMGKGSFKYAW 58


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 57.2 bits (132), Expect = 2e-10
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +1

Query: 124 REKTHINIVVIGHVDSGKSTTTGHLIY 204
           +EK HINIVVIGHVDSGKSTTTGHLIY
Sbjct: 3   KEKIHINIVVIGHVDSGKSTTTGHLIY 29



 Score = 40.7 bits (91), Expect = 1e-05
 Identities = 18/29 (62%), Positives = 19/29 (65%)
 Frame = +3

Query: 204 QCGGIDXRTIXXFXXEXQENG*XSFXYAW 290
           +CGGID RTI  F  E QE G  SF YAW
Sbjct: 30  KCGGIDKRTIEKFEKEAQEMGKGSFKYAW 58


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 130 KTHINIVVIGHVDSGKST 183
           K H  + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 70  LSRILHAVCNPVTNQKWAREKTHINIVVIGHVDSGKST 183
           LS++  +    ++ +  +R+ T INI  IGHV  GKST
Sbjct: 21  LSKLDVSKLTALSREVISRQAT-INIGTIGHVAHGKST 57


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 348 GANWVWDTRLR 316
           G+NW W+T LR
Sbjct: 23  GSNWNWNTLLR 33


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 348 GANWVWDTRLR 316
           G+NW W+T LR
Sbjct: 67  GSNWNWNTLLR 77


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 348 GANWVWDTRLR 316
           G+NW W+T LR
Sbjct: 67  GSNWNWNTLLR 77


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 348 GANWVWDTRLR 316
           G+NW W+T LR
Sbjct: 67  GSNWNWNTLLR 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,981
Number of Sequences: 438
Number of extensions: 3167
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)