Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_B16
(839 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB158503-1|BAD69710.1| 151|Homo sapiens splice variant of four ... 37 0.079
BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like pro... 32 3.0
AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein. 32 3.0
K01747-1|AAA51586.1| 330|Homo sapiens ACTA2 protein. 31 3.9
J05192-1|AAA51577.1| 377|Homo sapiens ACTA3 protein. 31 3.9
BC005374-1|AAH05374.1| 406|Homo sapiens thioredoxin domain cont... 30 9.1
AY359048-1|AAQ89407.1| 406|Homo sapiens TXNDC4 protein. 30 9.1
AL360084-2|CAH70308.1| 406|Homo sapiens thioredoxin domain cont... 30 9.1
AL358937-2|CAI95319.1| 406|Homo sapiens thioredoxin domain cont... 30 9.1
AL137072-1|CAH72172.1| 406|Homo sapiens thioredoxin domain cont... 30 9.1
AJ344330-1|CAC87611.1| 406|Homo sapiens ERp44 protein protein. 30 9.1
AB011145-1|BAA25499.1| 451|Homo sapiens KIAA0573 protein protein. 30 9.1
>AB158503-1|BAD69710.1| 151|Homo sapiens splice variant of four and
a half LIM domain protein 2 protein.
Length = 151
Score = 37.1 bits (82), Expect = 0.079
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 464 AG*EKGSTEACSSTLLLPRASTEPTARVSTCPLLTRSIPTSSLTAMS 604
AG S+ +S+ L PR S+ T R+S CP + ++P S+ +A S
Sbjct: 63 AGMRPASSATAASSQLEPRVSSPKTIRISVCPAMRNNMPCSAFSAKS 109
>BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like
protein rA9 protein.
Length = 1649
Score = 31.9 bits (69), Expect = 3.0
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = -3
Query: 561 SGQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLEL 382
+G E +VGS G S EH S E++E S EDSED DG LE+
Sbjct: 28 AGDFEESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSED-DGETLLEV 86
Query: 381 VG 376
G
Sbjct: 87 AG 88
>AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein.
Length = 1654
Score = 31.9 bits (69), Expect = 3.0
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = -3
Query: 561 SGQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLEL 382
+G E +VGS G S EH S E++E S EDSED DG LE+
Sbjct: 33 AGDFEESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSED-DGETLLEV 91
Query: 381 VG 376
G
Sbjct: 92 AG 93
>K01747-1|AAA51586.1| 330|Homo sapiens ACTA2 protein.
Length = 330
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 298 MNVDVVKQFMEMYKMGMLP-RGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACW 468
M +D+ + + Y M +L RG +FV T E ++ +K ++ Y A DF+ M TA W
Sbjct: 178 MRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKE-KLCYVALDFENEMATAAW 234
>J05192-1|AAA51577.1| 377|Homo sapiens ACTA3 protein.
Length = 377
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 298 MNVDVVKQFMEMYKMGMLP-RGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACW 468
M +D+ + + Y M +L RG +FV T E ++ +K ++ Y A DF+ M TA W
Sbjct: 178 MRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKE-KLCYVALDFENEMATAAW 234
>BC005374-1|AAH05374.1| 406|Homo sapiens thioredoxin domain
containing 4 (endoplasmic reticulum) protein.
Length = 406
Score = 30.3 bits (65), Expect = 9.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 281 FSMLYXLGDLLDVLKHGRLEDMVKQLHDAKL 189
F +Y GD DVL G+L+ V LH KL
Sbjct: 326 FRHMYVFGDFKDVLIPGKLKQFVFDLHSGKL 356
>AY359048-1|AAQ89407.1| 406|Homo sapiens TXNDC4 protein.
Length = 406
Score = 30.3 bits (65), Expect = 9.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 281 FSMLYXLGDLLDVLKHGRLEDMVKQLHDAKL 189
F +Y GD DVL G+L+ V LH KL
Sbjct: 326 FRHMYVFGDFKDVLIPGKLKQFVFDLHSGKL 356
>AL360084-2|CAH70308.1| 406|Homo sapiens thioredoxin domain
containing 4 (endoplasmic reticulum) protein.
Length = 406
Score = 30.3 bits (65), Expect = 9.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 281 FSMLYXLGDLLDVLKHGRLEDMVKQLHDAKL 189
F +Y GD DVL G+L+ V LH KL
Sbjct: 326 FRHMYVFGDFKDVLIPGKLKQFVFDLHSGKL 356
>AL358937-2|CAI95319.1| 406|Homo sapiens thioredoxin domain
containing 4 (endoplasmic reticulum) protein.
Length = 406
Score = 30.3 bits (65), Expect = 9.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 281 FSMLYXLGDLLDVLKHGRLEDMVKQLHDAKL 189
F +Y GD DVL G+L+ V LH KL
Sbjct: 326 FRHMYVFGDFKDVLIPGKLKQFVFDLHSGKL 356
>AL137072-1|CAH72172.1| 406|Homo sapiens thioredoxin domain
containing 4 (endoplasmic reticulum) protein.
Length = 406
Score = 30.3 bits (65), Expect = 9.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 281 FSMLYXLGDLLDVLKHGRLEDMVKQLHDAKL 189
F +Y GD DVL G+L+ V LH KL
Sbjct: 326 FRHMYVFGDFKDVLIPGKLKQFVFDLHSGKL 356
>AJ344330-1|CAC87611.1| 406|Homo sapiens ERp44 protein protein.
Length = 406
Score = 30.3 bits (65), Expect = 9.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 281 FSMLYXLGDLLDVLKHGRLEDMVKQLHDAKL 189
F +Y GD DVL G+L+ V LH KL
Sbjct: 326 FRHMYVFGDFKDVLIPGKLKQFVFDLHSGKL 356
>AB011145-1|BAA25499.1| 451|Homo sapiens KIAA0573 protein protein.
Length = 451
Score = 30.3 bits (65), Expect = 9.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 281 FSMLYXLGDLLDVLKHGRLEDMVKQLHDAKL 189
F +Y GD DVL G+L+ V LH KL
Sbjct: 371 FRHMYVFGDFKDVLIPGKLKQFVFDLHSGKL 401
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,366,633
Number of Sequences: 237096
Number of extensions: 2207491
Number of successful extensions: 4723
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4723
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -