Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_B16
         (839 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z81071-6|CAB03010.1|  464|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical ...    29   4.1  
AC084159-15|AAK39353.1|  418|Caenorhabditis elegans Hypothetical...    29   5.4  
AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical ...    28   9.5  
AC025721-12|AAK29899.1|  278|Caenorhabditis elegans Hypothetical...    28   9.5  

>Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical
           protein F49A5.7 protein.
          Length = 411

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +2

Query: 482 STEACSSTLLLPRASTEPTARVS-TCPLLTRSIPTSSLTAMSSVKPL 619
           + EA SST LL   ST  TA +S T   ++RSI   + TA ++++PL
Sbjct: 91  TNEASSSTKLL---STSSTAEISSTTRTVSRSIKPETSTASTTIRPL 134


>Z81071-6|CAB03010.1|  464|Caenorhabditis elegans Hypothetical
           protein F28F8.7 protein.
          Length = 464

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/71 (21%), Positives = 31/71 (43%)
 Frame = +1

Query: 187 RSFAS*SCLTISSSRPCLRTSRRSPRXYNIEKSCDKYMNVDVVKQFMEMYKMGMLPRGET 366
           R+F     + I   +  L+  ++ P    I+K+C    N+D +  F   ++  ++ +   
Sbjct: 223 RAFQPLRVVQIERFKDALKKMKKGPILREIQKNCMPNYNLDEIHHFCHAFQHHIMEKTSK 282

Query: 367 FVHTNELQMEE 399
             H NE   E+
Sbjct: 283 SCHCNEPLCED 293


>Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical
           protein F08H9.1 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 462 RSPHENIEVLSVVEDSEDFD 403
           R+P+ENI++L   +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600


>AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical
           protein F37B4.7 protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 704 IDWRKGVRRSLSQNDVMSYFMEDVHLNTYMYYLHM 808
           ++W++   + L  N+V     E V  ++YM YL M
Sbjct: 183 VEWKEAYEKKLEDNNVQGNLKEIVDQSSYMDYLRM 217


>AC084159-15|AAK39353.1|  418|Caenorhabditis elegans Hypothetical
           protein Y73B3A.13 protein.
          Length = 418

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/71 (21%), Positives = 30/71 (42%)
 Frame = +1

Query: 187 RSFAS*SCLTISSSRPCLRTSRRSPRXYNIEKSCDKYMNVDVVKQFMEMYKMGMLPRGET 366
           R+F       I   +  L+  ++ P    I+K+C    N+D +  F   ++  ++ +   
Sbjct: 202 RAFQPIRVAQIERFKDALKKMKKGPILREIQKNCMPNYNLDEIHHFCHAFQHHIMEKTSK 261

Query: 367 FVHTNELQMEE 399
             H NE   E+
Sbjct: 262 SCHCNEPLCED 272


>AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical
           protein K07D4.6 protein.
          Length = 389

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +2

Query: 479 GSTEACSS---TLLLPRASTEPTARVSTCPLLTRSIPTSSLT 595
           G+TE  S+   T      +TEPT   ST    T ++PTS+ T
Sbjct: 257 GTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTST 298


>AC025721-12|AAK29899.1|  278|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.13 protein.
          Length = 278

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 284 LFSMLYXLGDLLDVLKHGRLEDMVKQL 204
           LFSM Y + DLLD+  HG LE   + L
Sbjct: 84  LFSMGYFIYDLLDMHIHGELESSKEYL 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,213,837
Number of Sequences: 27780
Number of extensions: 338304
Number of successful extensions: 850
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)