Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_B13
         (919 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0D4Y8 Cluster: Os07g0596300 protein; n=7; Eukaryota|Re...    34   5.9  

>UniRef50_Q0D4Y8 Cluster: Os07g0596300 protein; n=7; Eukaryota|Rep:
           Os07g0596300 protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 754

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 24/74 (32%), Positives = 24/74 (32%)
 Frame = +3

Query: 261 PPXXXGRIGXPPWAXXGTRCXPXXPSXARHQXPXXXCGRSGXPXGRXXPXAGGEAAXXXG 440
           PP   GR   PP    G R     P       P     R G P     P AGG A     
Sbjct: 209 PPPPGGRPSAPPLPPPGGRASAPPP-------PPPPSTRLGAPPPPPPPGAGGRAPPPPP 261

Query: 441 RAGXALXXPPPRXP 482
             G  L  PPP  P
Sbjct: 262 APGGRLGGPPPPPP 275


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.316    0.146    0.502 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 368,221,792
Number of Sequences: 1657284
Number of extensions: 5033689
Number of successful extensions: 31166
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 11777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28399
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84031265255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)