Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_B13
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0287 - 16283460-16283658,16283696-16283802                       30   3.0  
07_01_0080 + 587674-588510                                             29   5.2  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   5.2  

>07_03_0287 - 16283460-16283658,16283696-16283802
          Length = 101

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = -1

Query: 919 GPGGGGXXXXXXXXXXXXGXXGXPGGGGXRGAXXGP 812
           GPGGGG               G  GGGG  G   GP
Sbjct: 18  GPGGGGEKTSGVDEAAEERGEGGSGGGGGGGGDGGP 53


>07_01_0080 + 587674-588510
          Length = 278

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 703 PPPPPXXGXXPXPGPP 750
           PPPPP  G  P P PP
Sbjct: 95  PPPPPSSGSPPPPPPP 110


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 703 PPPPPXXGXXPXPGPP 750
           PPPPP  G  P P PP
Sbjct: 354 PPPPPPKGPSPPPPPP 369


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.316    0.146    0.502 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,755,244
Number of Sequences: 37544
Number of extensions: 216814
Number of successful extensions: 1766
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)