Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_B08
         (902 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    31   0.063
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.78 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   7.3  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   9.6  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 30.7 bits (66), Expect = 0.063
 Identities = 24/66 (36%), Positives = 26/66 (39%)
 Frame = -1

Query: 890 GGGXXXXXGGXGXRGPXVSXXGXKGGXKGIPGXRXXGVRXXGGGAXGGXXPGGGTPXESL 711
           GGG     GG    G      G  GG  G P      +R   GGA GG   GGG+   S 
Sbjct: 817 GGGAGASGGGFLITGDPSDTIGAGGGGAGGP------LRGSSGGAGGGSSGGGGSGGTS- 869

Query: 710 XRXGGG 693
              GGG
Sbjct: 870 ---GGG 872



 Score = 25.4 bits (53), Expect = 2.4
 Identities = 17/45 (37%), Positives = 17/45 (37%)
 Frame = -1

Query: 863 GXGXRGPXVSXXGXKGGXKGIPGXRXXGVRXXGGGAXGGXXPGGG 729
           G G  GP     G  G   GI G         GGG  GG   GGG
Sbjct: 539 GGGSDGPEYEGAGRGGVGSGIGG---------GGGGGGGGRAGGG 574



 Score = 24.6 bits (51), Expect = 4.2
 Identities = 18/54 (33%), Positives = 18/54 (33%)
 Frame = -1

Query: 890 GGGXXXXXGGXGXRGPXVSXXGXKGGXKGIPGXRXXGVRXXGGGAXGGXXPGGG 729
           GGG        G R   V   G  GG    P     G    G G  GG   GGG
Sbjct: 517 GGGGGGSGCVNGSR--TVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGG 568


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 0.78
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -1

Query: 767 GGGAXGGXXPGGGTPXESLXRXGGG 693
           GGG  GG  PGGG         GGG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGG 227



 Score = 27.1 bits (57), Expect = 0.78
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -1

Query: 797 GXRXXGVRXXGGGAXGGXXPGGG 729
           G    G    GGG+ GG  PGGG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGG 227



 Score = 26.6 bits (56), Expect = 1.0
 Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
 Frame = -1

Query: 890 GGGXXXXXGGXGXRGPXVSXXGXKGGXK-GIPGXRXXGVRXXGGGAXGGXXPGGGTPXES 714
           GGG     GG G     +     +   K   PG    G    GGGA GG     G P   
Sbjct: 169 GGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGG---SGGGAPGGGGGSSGGPGPG 225

Query: 713 LXRXGGG 693
               GGG
Sbjct: 226 GGGGGGG 232


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 827 PXGKPXGPXPXXPPPXGXXPPPGVG 901
           P  +P  P P  PPP G  P P  G
Sbjct: 577 PNAQPP-PAPPPPPPMGPPPSPLAG 600


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -1

Query: 767 GGGAXGGXXPGGGTPXESLXRXGG 696
           GGG  GG    GG    SL   GG
Sbjct: 658 GGGGGGGSVGSGGIGSSSLGGGGG 681



 Score = 23.4 bits (48), Expect = 9.6
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = -1

Query: 827 GXKGGXKGIPGXRXXGVRXXGGGAXGGXXPGGG 729
           G  GG  G  G    G    GGG   G    GG
Sbjct: 657 GGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGG 689


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +2

Query: 839 PXGPXPXXPPPXGXXPPP 892
           P GP P  PP  G  PPP
Sbjct: 105 PNGPLP--PPMMGMRPPP 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,990
Number of Sequences: 2352
Number of extensions: 10073
Number of successful extensions: 95
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)