Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_B04
         (860 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.1  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   7.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.5  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   9.5  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 456 YVPYIIYVTYACIKRRLFKYYKQT 385
           YVP I+Y  Y       F  YK T
Sbjct: 329 YVPMILYCVYTTATYDSFMIYKTT 352


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 23/117 (19%), Positives = 46/117 (39%)
 Frame = +2

Query: 98  LYCCLLWQLSVTSPGNIFQRENARKVNIQFCIALKWPSRTVRIPKSTISLTTWAHATYHS 277
           LY   L  L +     +F+ EN  ++  QF    K+         S ++L +   +++  
Sbjct: 438 LYATFLIALKLVWIVALFKNENLSEMVKQFLFTQKFTFVAGLATLSVLNLLSVIKSSFLD 497

Query: 278 ASATGLMSGTRKLANVYRNLNVNKIV*IYTCK*N*NVCL*YLNNRLLIHAYVTYIIY 448
            +   ++   +    +   L     V    CK   N C  ++  +L+   +VTY +Y
Sbjct: 498 INTWKML--VKSFDAIDSKLQTGGKVETSICK---NFCFGFITKQLIFMIFVTYQLY 549


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 456 YVPYIIYVTYACIKRRLFKYYKQT 385
           YVP I+Y  Y       F  YK T
Sbjct: 54  YVPMILYCVYTTATYDSFMIYKTT 77


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 75  NVSNEKFYCIVVCC 116
           N +N K+Y + VCC
Sbjct: 49  NNTNRKYYWLNVCC 62


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 109 FVVAAVGYVTGQHFPT 156
           FV   +GY   QHF T
Sbjct: 421 FVAFTIGYDLNQHFET 436


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = +1

Query: 214 DCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPE 333
           D  N  +   +D++   D  +   D  N+R  K    VPE
Sbjct: 122 DASNGNLKFSIDNILKADFGRRITDPINIRKCKPKTVVPE 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,744
Number of Sequences: 336
Number of extensions: 3247
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)