Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_B02
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0771 + 6453130-6454488                                           35   0.072
11_01_0532 + 4201374-4201401,4201475-4202652,4204316-4204670,420...    31   1.5  
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029...    29   6.2  
09_02_0379 - 8210401-8210567,8210944-8213827                           28   8.3  

>11_01_0771 + 6453130-6454488
          Length = 452

 Score = 35.1 bits (77), Expect = 0.072
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +3

Query: 624 ISFXGLWGLPFNKSDXELEPFYNXD 698
           I F G W  PFN+SD E +PFY  D
Sbjct: 210 IYFKGKWDRPFNESDTERKPFYRHD 234


>11_01_0532 +
           4201374-4201401,4201475-4202652,4204316-4204670,
           4204791-4204864,4206965-4207056,4207500-4207573,
           4207680-4207822,4207889-4207909
          Length = 654

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -1

Query: 264 SDSRHQSPYPKRRDHNVPISLSL 196
           SDSR Q P+P  RDHN  +S S+
Sbjct: 584 SDSRGQGPHPNFRDHNGGVSSSI 606


>01_03_0179 +
           13500413-13500768,13502522-13502642,13502876-13502998,
           13504409-13504497,13504612-13504696,13504852-13505011,
           13505096-13505160,13505296-13505349,13505437-13505527,
           13505685-13505986,13506084-13506365,13506451-13506764,
           13506920-13507080,13507202-13507305,13507379-13507535,
           13507652-13507896,13507995-13508327,13508428-13508751,
           13508816-13508899,13509001-13509169,13509610-13509731,
           13510538-13510792,13511115-13511252
          Length = 1377

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 363 VRQGFVPFDQRCRIFGQNKRSAQLPVAITGRS*SDSR 253
           +RQG +PF Q    F   K S  +P A+T +  ++ R
Sbjct: 878 IRQGILPFAQLSLSFNDIKYSVDMPEAMTAQGVTEER 914


>09_02_0379 - 8210401-8210567,8210944-8213827
          Length = 1016

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -3

Query: 319 WAK*TLCSAACSYYRTLXKRFPSSKSISQTARSQRAHQSE 200
           WA  T  S  C++ ++L    PS   +S     Q  H SE
Sbjct: 502 WASATRISLMCNFIKSLPSELPSCPKLSVLVLQQNFHFSE 541


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,820,668
Number of Sequences: 37544
Number of extensions: 397133
Number of successful extensions: 920
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)