Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_A21
(1441 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 26 1.5
12_02_1174 - 26696869-26698191 30 5.2
03_02_0765 + 11000724-11002496 30 5.2
07_03_1751 - 29215074-29216270 29 6.8
06_03_1146 - 28004896-28005554,28005664-28005844 29 9.1
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 29 9.1
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 25.8 bits (54), Expect(2) = 1.5
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +2
Query: 743 PXLVXPPXPXXGLXXPFXX*PXAXLXPGXXXAPXXXAXXXSTPPPPP 883
P + PP P G+ F P P A S PPPP
Sbjct: 646 PNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPP 692
Score = 24.2 bits (50), Expect(2) = 1.5
Identities = 22/85 (25%), Positives = 22/85 (25%)
Frame = +2
Query: 869 PPPPPXXAXXXXXPXXXXXCTXXANXXAXAXXXXXPXPHXXPPXXAXXXXGXXXXXPXPX 1048
PPPPP A P A A P P PP P P
Sbjct: 714 PPPPPPPANRSNGPSAPAP-PLPPPLPAAANKRNPPAP--PPPPLMTGKKAPAPPPPPP- 769
Query: 1049 XSXPXPXPLXPXXPPSXXXXXXXHP 1123
P P P PP HP
Sbjct: 770 -QAPKPPGTVPPPPPLHGASGRPHP 793
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.9 bits (64), Expect = 5.2
Identities = 36/185 (19%), Positives = 41/185 (22%), Gaps = 1/185 (0%)
Frame = +2
Query: 869 PPPPPXXAXXXXXPXXXXXCTXXANXXAXAXXXXXPXPHXXPPXXAXXXXGXXXXXPXPX 1048
PPPPP P P P P P P
Sbjct: 125 PPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPS 184
Query: 1049 XSXPXPXPLXPXXPPSXXXXXXXHPXNQTXXTL-XSXXXVPXNXXXPXPPXSTXXLXVRH 1225
P P P P PPS P Q TL P P P T +
Sbjct: 185 LQPPSPPPPPPTRPPS-VKPPVVQPKPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPK 243
Query: 1226 ASXXXXPXXXAXXSXRTXAPXPEXXXXXTSPEXXPXKQTRPXXRXSEXSRRGTPXVXPIE 1405
P R P P P + E ++ P P
Sbjct: 244 PQPPPPPPRAPVKMPRVLEPKPSPPPPSPLPPPPEDYWSPTAVTPPEPTKPKPPPPSPPP 303
Query: 1406 XPRXP 1420
P+ P
Sbjct: 304 PPQQP 308
>03_02_0765 + 11000724-11002496
Length = 590
Score = 29.9 bits (64), Expect = 5.2
Identities = 27/117 (23%), Positives = 28/117 (23%)
Frame = -2
Query: 1092 GGXXGXSGXGXGXLXXGXGXXXXXPXXXXAXXGGXXWGXGXXXXXAXAXXLAXXVQXKXX 913
GG G G G L G G A GG G
Sbjct: 299 GGGGGLGGGAGGGLGGGAGAGGGLGGGAGAGGGGGLGGGAGGGGGLGGGAGGGLGGGAGA 358
Query: 912 XGXXXXXAXXGGGGGVDXXXAXXXGAXXXPGXXXAXGHXXXGXXXPXXGXGGXTXXG 742
G A GGGGG+ G G G G G GG G
Sbjct: 359 GGGLGGGAGAGGGGGLGGGAGGGGGLGGGAGGGLGGGAGAGGGLGGGAGTGGGGGLG 415
Score = 29.9 bits (64), Expect = 5.2
Identities = 29/117 (24%), Positives = 31/117 (26%)
Frame = -2
Query: 1092 GGXXGXSGXGXGXLXXGXGXXXXXPXXXXAXXGGXXWGXGXXXXXAXAXXLAXXVQXKXX 913
GG G +G G G L G G A GG G A
Sbjct: 390 GGLGGGAGAGGG-LGGGAGTGGGGGLGGGAGGGGGLGGGAGGGLGGGAGAGGGFGGGAGA 448
Query: 912 XGXXXXXAXXGGGGGVDXXXAXXXGAXXXPGXXXAXGHXXXGXXXPXXGXGGXTXXG 742
G GGGGG+D A G G G G GG G
Sbjct: 449 GGGGGLGGGAGGGGGLDGGAGGGAEAGGGFGGGAGAGTGGGGGLGGGAGGGGGLGGG 505
Score = 29.1 bits (62), Expect = 9.1
Identities = 27/117 (23%), Positives = 28/117 (23%)
Frame = -2
Query: 1092 GGXXGXSGXGXGXLXXGXGXXXXXPXXXXAXXGGXXWGXGXXXXXAXAXXLAXXVQXKXX 913
GG G SG G L G G GG G
Sbjct: 259 GGGGGLSGGAGGGLGGGAGAGGGGGLGGGTGGGGGLGGGTGGGGGLGGGAGGGLGGGAGA 318
Query: 912 XGXXXXXAXXGGGGGVDXXXAXXXGAXXXPGXXXAXGHXXXGXXXPXXGXGGXTXXG 742
G A GGGGG+ G G G G G GG G
Sbjct: 319 GGGLGGGAGAGGGGGLGGGAGGGGGLGGGAGGGLGGGAGAGGGLGGGAGAGGGGGLG 375
>07_03_1751 - 29215074-29216270
Length = 398
Score = 29.5 bits (63), Expect = 6.8
Identities = 29/119 (24%), Positives = 30/119 (25%), Gaps = 2/119 (1%)
Frame = -2
Query: 1092 GGXXGXSGXGXGXLXXGXGXXXXXPXXXXAXXGGXXWGXGXXXXXAX--AXXLAXXVQXK 919
GG G G G L G G GG G G A A
Sbjct: 202 GGGAGGGAGGGGGLGGGAGGGAGGGGGLGGGAGGGHGGGGGLGGGAGGGAGVGGGAGGGA 261
Query: 918 XXXGXXXXXAXXGGGGGVDXXXAXXXGAXXXPGXXXAXGHXXXGXXXPXXGXGGXTXXG 742
G GGGGG+ GA G G G G GG G
Sbjct: 262 GAGGGLGAGGGAGGGGGIGGGAGGGAGAGGGFGGGKGGGFGGGGGGGGGAGAGGGFGGG 320
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 29.1 bits (62), Expect = 9.1
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Frame = +1
Query: 979 PPXXPPP-PXXXXXXXXXXXPXPAXQSAXXSSAXSPXXAXPXXXXXAXPAEPDXXXTXLX 1155
PP PPP P PA +A S A SP P P P T
Sbjct: 145 PPAVPPPVAPVPMPSPASSPPSPAPAAATPSLAPSPVATTPSPSPSVSPMAPAPAPTTST 204
Query: 1156 XKXPP 1170
PP
Sbjct: 205 PSSPP 209
>05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 29.1 bits (62), Expect = 9.1
Identities = 16/68 (23%), Positives = 19/68 (27%)
Frame = +2
Query: 869 PPPPPXXAXXXXXPXXXXXCTXXANXXAXAXXXXXPXPHXXPPXXAXXXXGXXXXXPXPX 1048
PPPPP + P + P P PP A P P
Sbjct: 82 PPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAPVPAAAPPPTAPSPYSAPSPTPTPT 141
Query: 1049 XSXPXPXP 1072
+ P P P
Sbjct: 142 HTQPRPSP 149
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,117,163
Number of Sequences: 37544
Number of extensions: 189794
Number of successful extensions: 796
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4571230552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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