Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_A19
         (827 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81082-6|CAB03098.1|  279|Caenorhabditis elegans Hypothetical pr...    29   5.4  
AL034543-5|CAA22519.1|  279|Caenorhabditis elegans Hypothetical ...    29   5.4  
AL034543-1|CAA22516.1|  243|Caenorhabditis elegans Hypothetical ...    29   5.4  
U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical pr...    28   7.1  

>Z81082-6|CAB03098.1|  279|Caenorhabditis elegans Hypothetical
           protein F42G4.6 protein.
          Length = 279

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +1

Query: 166 ENADSXNGYXPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 300
           E+ D  N   P ++   P  +N PK    + NG +P+DN   YV+ P
Sbjct: 42  ESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86


>AL034543-5|CAA22519.1|  279|Caenorhabditis elegans Hypothetical
           protein F42G4.6 protein.
          Length = 279

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +1

Query: 166 ENADSXNGYXPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 300
           E+ D  N   P ++   P  +N PK    + NG +P+DN   YV+ P
Sbjct: 42  ESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86


>AL034543-1|CAA22516.1|  243|Caenorhabditis elegans Hypothetical
           protein Y81G3A.1 protein.
          Length = 243

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +1

Query: 166 ENADSXNGYXPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 300
           E+ D  N   P ++   P  +N PK    + NG +P+DN   YV+ P
Sbjct: 42  ESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86


>U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical
           protein C30G12.1 protein.
          Length = 469

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 236 TTTLMETATNLSTTVHITWTVPKADLTSSLPLS 334
           TTT M T T  ST +  T T P+     ++P S
Sbjct: 294 TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFS 326


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,748,817
Number of Sequences: 27780
Number of extensions: 248767
Number of successful extensions: 543
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)