Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_A17
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 36 0.051
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 32 0.48
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 32 0.48
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 32 0.48
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 32 0.48
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 32 0.48
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 32 0.48
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 32 0.48
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 32 0.48
AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical ... 32 0.48
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 32 0.48
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 32 0.48
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 31 1.5
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 31 1.5
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 31 1.5
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 31 1.5
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 31 1.5
U32305-8|AAK18853.4| 492|Caenorhabditis elegans Regulator of g ... 31 1.5
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 31 1.5
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 31 1.5
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 31 1.5
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 30 1.9
U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical p... 30 1.9
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 30 2.6
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 30 2.6
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 30 2.6
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 30 2.6
Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical pr... 29 3.4
U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated ... 29 3.4
AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. 29 3.4
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 29 4.5
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 29 4.5
U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b ... 29 4.5
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 4.5
Z75543-9|CAA99869.1| 194|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF100670-2|AAN73857.3| 554|Caenorhabditis elegans Hypothetical ... 29 5.9
AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical ... 29 5.9
AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical ... 29 5.9
AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical ... 29 5.9
AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical ... 29 5.9
AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical ... 29 5.9
AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical ... 29 5.9
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 28 7.8
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 28 7.8
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 35.5 bits (78), Expect = 0.051
Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 7/139 (5%)
Frame = +1
Query: 235 LEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQXALGDANGK-------AKEA 393
L++Q N K+KD + K+ K + + A A+ LQ L + AKEA
Sbjct: 125 LQEQTNDAKKAKD--ELQKSLKSAAARATEATTAVAE-LQAKLQTVEKEHKKEIEDAKEA 181
Query: 394 LEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNVQETNE 573
L +QN ER EL+K ++++ +E ++N V A Q E
Sbjct: 182 LAAEKQNSEREKMELKKLTEELQRMNLENKE-----LKNRVASENSRATGAVQEAQVLQE 236
Query: 574 KLAPKIKAXYDDFAKXTQE 630
KL +KA + K T +
Sbjct: 237 KLQQALKALDEKTTKLTTQ 255
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 331 NAFAKSLQXALGDANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQ 507
N + L +G A E +Q N+ + + K H DV+ ++ALR L A Q
Sbjct: 14 NRTKEKLLEGIGKAKATQDEVFDQHAANLNKQSKSCEKLHKDVKNYSSALRTLLSAEKQ 72
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 32.3 bits (70), Expect = 0.48
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL* 238
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS----- 122
Query: 239 NNSLTRSPSQRTHRTSA 289
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 32.3 bits (70), Expect = 0.48
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL* 238
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS----- 122
Query: 239 NNSLTRSPSQRTHRTSA 289
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 32.3 bits (70), Expect = 0.48
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL* 238
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS----- 122
Query: 239 NNSLTRSPSQRTHRTSA 289
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 32.3 bits (70), Expect = 0.48
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL* 238
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS----- 122
Query: 239 NNSLTRSPSQRTHRTSA 289
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 32.3 bits (70), Expect = 0.48
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL* 238
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS----- 122
Query: 239 NNSLTRSPSQRTHRTSA 289
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 32.3 bits (70), Expect = 0.48
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL* 238
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS----- 122
Query: 239 NNSLTRSPSQRTHRTSA 289
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/91 (27%), Positives = 44/91 (48%)
Frame = +1
Query: 310 ESVLQQLNAFAKSLQXALGDANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATALREK 489
+++ +++ A AL A+ A+E + Q + +ER EELR D +K T +
Sbjct: 2 DAIKKKMQAMKIEKDNALDRADA-AEEKVRQITEKLERVEEELR----DTQKKMTQTGDD 56
Query: 490 LQAAVQNTVQXSXKLAKKVSSNVQETNEKLA 582
L A ++ + KL +K VQE ++A
Sbjct: 57 LDKAQEDLSAATSKLEEK-EKTVQEAEAEVA 86
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/91 (27%), Positives = 44/91 (48%)
Frame = +1
Query: 310 ESVLQQLNAFAKSLQXALGDANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATALREK 489
+++ +++ A AL A+ A+E + Q + +ER EELR D +K T +
Sbjct: 2 DAIKKKMQAMKIEKDNALDRADA-AEEKVRQITEKLERVEEELR----DTQKKMTQTGDD 56
Query: 490 LQAAVQNTVQXSXKLAKKVSSNVQETNEKLA 582
L A ++ + KL +K VQE ++A
Sbjct: 57 LDKAQEDLSAATSKLEEK-EKTVQEAEAEVA 86
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/91 (27%), Positives = 44/91 (48%)
Frame = +1
Query: 310 ESVLQQLNAFAKSLQXALGDANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATALREK 489
+++ +++ A AL A+ A+E + Q + +ER EELR D +K T +
Sbjct: 2 DAIKKKMQAMKIEKDNALDRADA-AEEKVRQITEKLERVEEELR----DTQKKMTQTGDD 56
Query: 490 LQAAVQNTVQXSXKLAKKVSSNVQETNEKLA 582
L A ++ + KL +K VQE ++A
Sbjct: 57 LDKAQEDLSAATSKLEEK-EKTVQEAEAEVA 86
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/91 (27%), Positives = 44/91 (48%)
Frame = +1
Query: 310 ESVLQQLNAFAKSLQXALGDANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATALREK 489
+++ +++ A AL A+ A+E + Q + +ER EELR D +K T +
Sbjct: 2 DAIKKKMQAMKIEKDNALDRADA-AEEKVRQITEKLERVEEELR----DTQKKMTQTGDD 56
Query: 490 LQAAVQNTVQXSXKLAKKVSSNVQETNEKLA 582
L A ++ + KL +K VQE ++A
Sbjct: 57 LDKAQEDLSAATSKLEEK-EKTVQEAEAEVA 86
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 32.3 bits (70), Expect = 0.48
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL* 238
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS----- 122
Query: 239 NNSLTRSPSQRTHRTSA 289
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical
protein Y105E8B.1f protein.
Length = 151
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/91 (27%), Positives = 44/91 (48%)
Frame = +1
Query: 310 ESVLQQLNAFAKSLQXALGDANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATALREK 489
+++ +++ A AL A+ A+E + Q + +ER EELR D +K T +
Sbjct: 2 DAIKKKMQAMKIEKDNALDRADA-AEEKVRQITEKLERVEEELR----DTQKKMTQTGDD 56
Query: 490 LQAAVQNTVQXSXKLAKKVSSNVQETNEKLA 582
L A ++ + KL +K VQE ++A
Sbjct: 57 LDKAQEDLSAATSKLEEK-EKTVQEAEAEVA 86
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/91 (27%), Positives = 44/91 (48%)
Frame = +1
Query: 310 ESVLQQLNAFAKSLQXALGDANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATALREK 489
+++ +++ A AL A+ A+E + Q + +ER EELR D +K T +
Sbjct: 2 DAIKKKMQAMKIEKDNALDRADA-AEEKVRQITEKLERVEEELR----DTQKKMTQTGDD 56
Query: 490 LQAAVQNTVQXSXKLAKKVSSNVQETNEKLA 582
L A ++ + KL +K VQE ++A
Sbjct: 57 LDKAQEDLSAATSKLEEK-EKTVQEAEAEVA 86
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/91 (27%), Positives = 44/91 (48%)
Frame = +1
Query: 310 ESVLQQLNAFAKSLQXALGDANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATALREK 489
+++ +++ A AL A+ A+E + Q + +ER EELR D +K T +
Sbjct: 2 DAIKKKMQAMKIEKDNALDRADA-AEEKVRQITEKLERVEEELR----DTQKKMTQTGDD 56
Query: 490 LQAAVQNTVQXSXKLAKKVSSNVQETNEKLA 582
L A ++ + KL +K VQE ++A
Sbjct: 57 LDKAQEDLSAATSKLEEK-EKTVQEAEAEVA 86
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 30.7 bits (66), Expect = 1.5
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 3/123 (2%)
Frame = +1
Query: 220 EFHKTLEQQFNSLTKS-KDAQDFSKAWKDGSESVLQQLNAFAKSLQX-ALGDAN-GKAKE 390
E + LE + NS KS + + + ++ +E + QQ A A L+ +A K +
Sbjct: 1130 ELEEELEAERNSRQKSDRSRSEAERELEELTERLEQQGGATAAQLEANKKREAEIAKLRR 1189
Query: 391 ALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNVQETN 570
E+ N E LRK H D T E LQ + KL + + + T+
Sbjct: 1190 EKEEDSLNHETAISSLRKRHGDSVAELTEQLETLQKLKAKSEAEKSKLQRDLEESQHATD 1249
Query: 571 EKL 579
++
Sbjct: 1250 SEV 1252
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 367 DANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATAL---REKLQAAVQNTVQXSXKLA 537
D + EA E++R+N E ELR+ + D+ + +AL R KL+ + ++A
Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758
Query: 538 KKVSSNVQE 564
++ + V++
Sbjct: 1759 NELKNAVEQ 1767
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 30.7 bits (66), Expect = 1.5
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 3/123 (2%)
Frame = +1
Query: 220 EFHKTLEQQFNSLTKS-KDAQDFSKAWKDGSESVLQQLNAFAKSLQX-ALGDAN-GKAKE 390
E + LE + NS KS + + + ++ +E + QQ A A L+ +A K +
Sbjct: 1130 ELEEELEAERNSRQKSDRSRSEAERELEELTERLEQQGGATAAQLEANKKREAEIAKLRR 1189
Query: 391 ALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNVQETN 570
E+ N E LRK H D T E LQ + KL + + + T+
Sbjct: 1190 EKEEDSLNHETAISSLRKRHGDSVAELTEQLETLQKLKAKSEAEKSKLQRDLEESQHATD 1249
Query: 571 EKL 579
++
Sbjct: 1250 SEV 1252
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 367 DANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATAL---REKLQAAVQNTVQXSXKLA 537
D + EA E++R+N E ELR+ + D+ + +AL R KL+ + ++A
Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758
Query: 538 KKVSSNVQE 564
++ + V++
Sbjct: 1759 NELKNAVEQ 1767
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 394 LEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNVQETNE 573
L+ + +E+ EEL+K+H + + L E+ Q +Q + K+ SSN+ N+
Sbjct: 728 LDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQ--LQDQLREEKEQSSNLLVLNQ 785
Query: 574 KL 579
K+
Sbjct: 786 KI 787
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 394 LEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNVQETNE 573
L+ + +E+ EEL+K+H + + L E+ Q +Q + K+ SSN+ N+
Sbjct: 728 LDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQ--LQDQLREEKEQSSNLLVLNQ 785
Query: 574 KL 579
K+
Sbjct: 786 KI 787
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/108 (22%), Positives = 53/108 (49%)
Frame = +1
Query: 241 QQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQXALGDANGKAKEALEQSRQNIE 420
+ F + +++ + ++A K ++++ Q+L K + LG+ GK+ L++ R+ +E
Sbjct: 1490 ETFRLRNQLEESGEQTEAVKRENKALAQEL----KDIADQLGEG-GKSVHDLQKMRRRLE 1544
Query: 421 RTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNVQE 564
EEL++A + E A K+ A Q ++ K++ +E
Sbjct: 1545 IEKEELQQALDEAECALEAEEAKVMRAQIEVSQIRSEIEKRLQEKEEE 1592
>U32305-8|AAK18853.4| 492|Caenorhabditis elegans Regulator of g
protein signalingprotein 5 protein.
Length = 492
Score = 30.7 bits (66), Expect = 1.5
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Frame = +1
Query: 226 HKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQXALGDANGKAKEALEQS 405
H + Q NSLT ++ + D D +++Q A SL L D++ AL
Sbjct: 42 HICIPAQRNSLTVAQQSADIGSG-SDHEGIIVKQKPQLAFSLDRLLIDSS-----ALSYF 95
Query: 406 RQNIERTXE-ELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNVQETNEKLA 582
Q ++ T + L K VE ++ E++QAA + +++ + + K + ++ L
Sbjct: 96 IQYLDSTDKLNLIKFWMHVEGFKSSFSEQIQAAQELSLRDAKSIYDKYIDDGSTSSLALP 155
Query: 583 PKIKAXYDD 609
KIK DD
Sbjct: 156 RKIKQIVDD 164
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = +1
Query: 298 KDGSESVLQQLNAFAKSLQXALGDANGK-AKEALEQSRQNIERTXEELRKAHPDVEKNAT 474
K E +++L + L G+ KE ++ ++ E T E ++A ++
Sbjct: 526 KANDEKEMEELKKEIEMLDNQFKTVRGEIVKETSQREQKVAELTTLERKEARDQIQM--- 582
Query: 475 ALREKLQAAVQNTVQXSXKLAKKVSSNVQETNEKLAPKIKA 597
EKL AA++NT KL ++VS V+++ E++ +++
Sbjct: 583 ---EKLDAAIENTT----KLTEQVSDAVEKSEEEMVQILRS 616
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = +1
Query: 298 KDGSESVLQQLNAFAKSLQXALGDANGK-AKEALEQSRQNIERTXEELRKAHPDVEKNAT 474
K E +++L + L G+ KE ++ ++ E T E ++A ++
Sbjct: 526 KANDEKEMEELKKEIEMLDNQFKTVRGEIVKETSQREQKVAELTTLERKEARDQIQM--- 582
Query: 475 ALREKLQAAVQNTVQXSXKLAKKVSSNVQETNEKLAPKIKA 597
EKL AA++NT KL ++VS V+++ E++ +++
Sbjct: 583 ---EKLDAAIENTT----KLTEQVSDAVEKSEEEMVQILRS 616
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = +1
Query: 298 KDGSESVLQQLNAFAKSLQXALGDANGK-AKEALEQSRQNIERTXEELRKAHPDVEKNAT 474
K E +++L + L G+ KE ++ ++ E T E ++A ++
Sbjct: 571 KANDEKEMEELKKEIEMLDNQFKTVRGEIVKETSQREQKVAELTTLERKEARDQIQM--- 627
Query: 475 ALREKLQAAVQNTVQXSXKLAKKVSSNVQETNEKLAPKIKA 597
EKL AA++NT KL ++VS V+++ E++ +++
Sbjct: 628 ---EKLDAAIENTT----KLTEQVSDAVEKSEEEMVQILRS 661
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +1
Query: 430 EELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNVQETNEKLAPKIKAXYDD 609
+ + K+ V + + LQ A + VQ + K + SNV E + + I DD
Sbjct: 286 DTIDKSKTTVAADVAKMSGALQKAEEEVVQTIDQTVKNIKSNVNEVKKDVEKNIAEKVDD 345
Query: 610 FAKXTQE 630
K ++
Sbjct: 346 ITKELEK 352
>U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical
protein C32E8.11 protein.
Length = 1927
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +1
Query: 238 EQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQXALGDANGKAKEALEQSRQNI 417
E FN L + KDA W + +E V +L L + K++E + +
Sbjct: 555 ETAFNILLRLKDAISMIIGWAETNEEVHNRLMIMCLELMNRMPPVYTKSEE--DTYELTV 612
Query: 418 ERTXEELRKAHPDVEKNATALRE 486
E R +H DV K++T++ +
Sbjct: 613 TINGESCRISHFDVLKSSTSVHQ 635
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/118 (17%), Positives = 48/118 (40%)
Frame = +1
Query: 238 EQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQXALGDANGKAKEALEQSRQNI 417
E++ + K K A + +D + + L ++L + + A E+ +N+
Sbjct: 800 EEKTQEIEKLKSAVTATTQERDELTATSESLRTECENLNSKIQSIEESRRHAEEKGSENL 859
Query: 418 ERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNVQETNEKLAPKI 591
ER E + D+E+ RE ++Q ++ + + + + ++L KI
Sbjct: 860 ERMITEKSRLEKDIEE-----RESTIQSIQEALETKDNEIESLKTTQRVVEDELVSKI 912
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/118 (17%), Positives = 48/118 (40%)
Frame = +1
Query: 238 EQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQXALGDANGKAKEALEQSRQNI 417
E++ + K K A + +D + + L ++L + + A E+ +N+
Sbjct: 802 EEKTQEIEKLKSAVTATTQERDELTATSESLRTECENLNSKIQSIEESRRHAEEKGSENL 861
Query: 418 ERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNVQETNEKLAPKI 591
ER E + D+E+ RE ++Q ++ + + + + ++L KI
Sbjct: 862 ERMITEKSRLEKDIEE-----RESTIQSIQEALETKDNEIESLKTTQRVVEDELVSKI 914
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +1
Query: 364 GDANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKK 543
G ++G K+ ++++ + ++ +++KN TAL EKL+A + Q KK
Sbjct: 15 GSSSGGGKKLDSLPKEDLVKFAKKQVAHVAEMKKNQTALMEKLKAKMSELEQ-----VKK 69
Query: 544 VSSNVQETNEKL 579
+ N++ NEKL
Sbjct: 70 DAENLKLINEKL 81
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +1
Query: 364 GDANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKK 543
G ++G K+ ++++ + ++ +++KN TAL EKL+A + Q KK
Sbjct: 15 GSSSGGGKKLDSLPKEDLVKFAKKQVAHVAEMKKNQTALMEKLKAKMSELEQ-----VKK 69
Query: 544 VSSNVQETNEKL 579
+ N++ NEKL
Sbjct: 70 DAENLKLINEKL 81
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/118 (17%), Positives = 48/118 (40%)
Frame = +1
Query: 238 EQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQXALGDANGKAKEALEQSRQNI 417
E++ + K K A + +D + + L ++L + + A E+ +N+
Sbjct: 802 EEKTQEIEKLKSAVTATTQERDELTATSESLRTECENLNSKIQSIEESRRHAEEKGSENL 861
Query: 418 ERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNVQETNEKLAPKI 591
ER E + D+E+ RE ++Q ++ + + + + ++L KI
Sbjct: 862 ERMITEKSRLEKDIEE-----RESTIQSIQEALETKDNEIESLKTTQRVVEDELVSKI 914
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 29.9 bits (64), Expect = 2.6
Identities = 30/99 (30%), Positives = 43/99 (43%)
Frame = +1
Query: 220 EFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQXALGDANGKAKEALE 399
+F LEQ+ N L + K Q KAW G E + NA L+ A A+G A + E
Sbjct: 680 KFRGHLEQRQNELVELKREQKKLKAWDVGQEG---EANAARLLLELAPAGASG-APDVKE 735
Query: 400 QSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTV 516
Q + R + KA + + +E L A V +V
Sbjct: 736 QKEPPVVRRLKAHIKA---INEGRRYDKEDLDAIVLESV 771
>Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical
protein K08H10.1 protein.
Length = 733
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/90 (16%), Positives = 34/90 (37%)
Frame = +1
Query: 364 GDANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKK 543
G+A K EA + ++ ++ A D + + ++ EK+ ++ + + A
Sbjct: 377 GEAKDKMGEAWDHTKDKAGEAKDKASDAADDAQGKSKSMTEKIGDSISGAWESTKDTAVS 436
Query: 544 VSSNVQETNEKLAPKIKAXYDDFAKXTQEV 633
E K+ I YD + ++
Sbjct: 437 AKDKTAEAAGKVGDSISGAYDTVKEKASDI 466
>U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated
protein 11, isoform d protein.
Length = 534
Score = 29.5 bits (63), Expect = 3.4
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Frame = +1
Query: 334 AFAKSLQXALGDANGKAKEALEQSR-QNIERTXEELRKAHPDVEKNATALREKLQAAVQ- 507
AF++ Q ALGDA + LEQ R + E + + A+P A+A +A Q
Sbjct: 325 AFSQQPQPALGDAERQRYIELEQERLRQFEDQKKSINSANPFANDVASAAPAPATSAAQP 384
Query: 508 ---NTVQXSXKLAKKVSSNVQETNEKLAP--KIKAXYDDFAKXTQEV 633
+ Q S + + +Q + + AP A DD A+ T ++
Sbjct: 385 DLLDMFQSSAAPLLQCNRKLQMVSHQAAPFGYPNAHPDDLARMTAQM 431
>AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein.
Length = 733
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/90 (16%), Positives = 34/90 (37%)
Frame = +1
Query: 364 GDANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKK 543
G+A K EA + ++ ++ A D + + ++ EK+ ++ + + A
Sbjct: 377 GEAKDKMGEAWDHTKDKAGEAKDKASDAADDAQGKSKSMTEKIGDSISGAWESTKDTAVS 436
Query: 544 VSSNVQETNEKLAPKIKAXYDDFAKXTQEV 633
E K+ I YD + ++
Sbjct: 437 AKDKTAEAAGKVGDSISGAYDTVKEKASDI 466
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 29.1 bits (62), Expect = 4.5
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Frame = +1
Query: 220 EFHKTLEQQFNSLTKSKDAQ-DFSKAWKDGSESVLQQLNAFAKSLQX-ALGDAN-GKAKE 390
E + LE + S +K+ A+ D + ++ E + +Q A A ++ +A K +
Sbjct: 1126 ELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEVNKKREAELAKLRR 1185
Query: 391 ALEQSRQNIERTXEELRKAHPDVEKNATALREKL---QAAVQNTVQXSXKLAKKVSSNV- 558
LE++ N E LRK H D T ++L +A V+ + + A+ +++ +
Sbjct: 1186 DLEEANMNHENQLGGLRKKHTDAVAELTDQLDQLNKAKAKVEKDKAQAVRDAEDLAAQLD 1245
Query: 559 QETNEKL 579
QET+ KL
Sbjct: 1246 QETSGKL 1252
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 29.1 bits (62), Expect = 4.5
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Frame = +1
Query: 220 EFHKTLEQQFNSLTKSKDAQ-DFSKAWKDGSESVLQQLNAFAKSLQX-ALGDAN-GKAKE 390
E + LE + S +K+ A+ D + ++ E + +Q A A ++ +A K +
Sbjct: 1126 ELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEVNKKREAELAKLRR 1185
Query: 391 ALEQSRQNIERTXEELRKAHPDVEKNATALREKL---QAAVQNTVQXSXKLAKKVSSNV- 558
LE++ N E LRK H D T ++L +A V+ + + A+ +++ +
Sbjct: 1186 DLEEANMNHENQLGGLRKKHTDAVAELTDQLDQLNKAKAKVEKDKAQAVRDAEDLAAQLD 1245
Query: 559 QETNEKL 579
QET+ KL
Sbjct: 1246 QETSGKL 1252
>U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b
homolog protein 2 protein.
Length = 305
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 147 ALAQGAMVRRDAPDFFKDIEHHTKGVP 227
A Q A DAP+FF+ + H +GVP
Sbjct: 26 ASTQAAAATDDAPNFFQKLAHRFQGVP 52
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 29.1 bits (62), Expect = 4.5
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Frame = +1
Query: 220 EFHKTLEQQFNSLTKSKDAQ-DFSKAWKDGSESVLQQLNAFAKSLQX-ALGDAN-GKAKE 390
E + LE + S +K+ A+ D + ++ E + +Q A A ++ +A K +
Sbjct: 1129 ELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEVNKKREAELAKLRR 1188
Query: 391 ALEQSRQNIERTXEELRKAHPDVEKNATALREKL---QAAVQNTVQXSXKLAKKVSSNV- 558
LE++ N E LRK H D T ++L +A V+ + + A+ +++ +
Sbjct: 1189 DLEEANMNHENQLGGLRKKHTDAVAELTDQLDQLNKAKAKVEKDKAQAVRDAEDLAAQLD 1248
Query: 559 QETNEKL 579
QET+ KL
Sbjct: 1249 QETSGKL 1255
>Z75543-9|CAA99869.1| 194|Caenorhabditis elegans Hypothetical
protein K01D12.10 protein.
Length = 194
Score = 28.7 bits (61), Expect = 5.9
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 313 SVLQQLNAFAKSLQXALGD---ANGKAKEALEQS-RQNIERTXEELRKAHPDVEKNATAL 480
+VLQQ+N A++ AL D GK +E E+ + E+ EE+ K VEK
Sbjct: 65 AVLQQVNQAAQADPEALVDQEVLEGKQEEKEEEEVEKKEEKEEEEVGKKEEKVEKKEKE- 123
Query: 481 REKLQAAVQNTVQXSXKLAKKVSSNVQETNEKL 579
+ ++AAV+ V+ + + ++++ ++
Sbjct: 124 EKMVKAAVEVEVEEMVVVGLETGNSLERRRRRI 156
>AF100670-2|AAN73857.3| 554|Caenorhabditis elegans Hypothetical
protein M4.1 protein.
Length = 554
Score = 28.7 bits (61), Expect = 5.9
Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +1
Query: 229 KTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQXALGDANGKAKEAL---E 399
++LE Q + L+ + + D K + A K + L + NG+ L E
Sbjct: 220 ESLEAQLSILSSNNNNPDKQKEELLKMIDEKTKFEAKTKEMIRRLIEENGETTSRLKDME 279
Query: 400 QSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKK 543
+S + E+T ++LR + D+E E A Q + L +K
Sbjct: 280 RSLETTEQTYQQLRSRNEDLETALAETTEMFDAKAAELEQATADLIEK 327
>AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical
protein C04C3.5a protein.
Length = 331
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 379 KAKEALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNV 558
+A++ L+ + QNI + E+L +V + L EK++ + Q + AK S
Sbjct: 105 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 164
Query: 559 Q--ETNEKLAPKIKAXYD 606
Q + E+ ++K Y+
Sbjct: 165 QYMDEYERFEERLKKLYE 182
>AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical
protein C04C3.5c protein.
Length = 393
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 379 KAKEALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNV 558
+A++ L+ + QNI + E+L +V + L EK++ + Q + AK S
Sbjct: 167 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 226
Query: 559 Q--ETNEKLAPKIKAXYD 606
Q + E+ ++K Y+
Sbjct: 227 QYMDEYERFEERLKKLYE 244
>AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical
protein C04C3.5b protein.
Length = 404
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 379 KAKEALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNV 558
+A++ L+ + QNI + E+L +V + L EK++ + Q + AK S
Sbjct: 178 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 237
Query: 559 Q--ETNEKLAPKIKAXYD 606
Q + E+ ++K Y+
Sbjct: 238 QYMDEYERFEERLKKLYE 255
>AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical
protein protein.
Length = 331
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 379 KAKEALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNV 558
+A++ L+ + QNI + E+L +V + L EK++ + Q + AK S
Sbjct: 105 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 164
Query: 559 Q--ETNEKLAPKIKAXYD 606
Q + E+ ++K Y+
Sbjct: 165 QYMDEYERFEERLKKLYE 182
>AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical
protein protein.
Length = 393
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 379 KAKEALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNV 558
+A++ L+ + QNI + E+L +V + L EK++ + Q + AK S
Sbjct: 167 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 226
Query: 559 Q--ETNEKLAPKIKAXYD 606
Q + E+ ++K Y+
Sbjct: 227 QYMDEYERFEERLKKLYE 244
>AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical
protein protein.
Length = 404
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 379 KAKEALEQSRQNIERTXEELRKAHPDVEKNATALREKLQAAVQNTVQXSXKLAKKVSSNV 558
+A++ L+ + QNI + E+L +V + L EK++ + Q + AK S
Sbjct: 178 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 237
Query: 559 Q--ETNEKLAPKIKAXYD 606
Q + E+ ++K Y+
Sbjct: 238 QYMDEYERFEERLKKLYE 255
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 143 HRSGPRSDGATRRSRLLQGHRTPHQGSSIRL 235
HR GP GAT R+L+ R P++ I L
Sbjct: 92 HRRGPADQGATYDERILEIRRDPNRTCHIAL 122
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Frame = +1
Query: 310 ESVLQQLNAFAKSLQXALGDANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATALREK 489
++ +Q++ K+L L + + +L++ + + E+T L K +EK+ LRE+
Sbjct: 115 DATIQKIAEKEKNLSKLLKELS-IVDSSLKEEKASFEKTQSALLKEKGKIEKDKLMLREE 173
Query: 490 LQ------AAVQNTVQXSXKLAKKVSSNVQETNEK 576
Q A VQ S + ++ E NEK
Sbjct: 174 AQKQASMNAEVQKKELESQERLSVLNKQFMEENEK 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,339,386
Number of Sequences: 27780
Number of extensions: 228152
Number of successful extensions: 1272
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -