Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_A14
(919 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.099
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.13
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.17
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.23
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.92
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 2.1
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 2.8
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 6.5
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.099
Identities = 24/74 (32%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = +1
Query: 589 GAPPHXXKPQKXPPXGXIKGAPKXPPXPRXSPXXXRXPPPGGGXPPXXXXXXPXXXGXXX 768
GAPP PP GAP P P+ S P P G PP P
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAP---PVPKPSVAAPPVPAPSSGIPP-----VPKPAAGVP 1189
Query: 769 PLPP---XPPXXNP 801
P+PP PP P
Sbjct: 1190 PVPPPSEAPPVPKP 1203
Score = 31.9 bits (69), Expect = 0.13
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Frame = +1
Query: 589 GAPPHXXKPQKXPPXGXIKGAPKXPPXPRXSPXXXRXPPPGGGXP-PXXXXXXPXXXGXX 765
GAPP PP GA PP P+ S P P G P P P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGA---PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPS 1175
Query: 766 XPLPPXP-PXXN-PXSPP 813
+PP P P P PP
Sbjct: 1176 SGIPPVPKPAAGVPPVPP 1193
Score = 29.5 bits (63), Expect = 0.70
Identities = 19/66 (28%), Positives = 19/66 (28%), Gaps = 1/66 (1%)
Frame = +1
Query: 592 APPHXXKPQKXPPXGXIKGAPKXPPX-PRXSPXXXRXPPPGGGXPPXXXXXXPXXXGXXX 768
APP P GAP PP P S P P G P P
Sbjct: 1040 APPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSV 1099
Query: 769 PLPPXP 786
PP P
Sbjct: 1100 AAPPVP 1105
Score = 27.1 bits (57), Expect = 3.7
Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 3/78 (3%)
Frame = +1
Query: 589 GAPPHXXKPQKXPPXGXIKGAPKXPPXPRXSPXXXRXPPPGGGXPPXXXXXXPXXXGXXX 768
GAPP P PP K + PP P+ S P P G P P
Sbjct: 1081 GAPP-VPAPSGIPPVP--KPSVAAPPVPKPSVAVPPVPAPSGAPP----VPKPSVAAPPV 1133
Query: 769 PLP---PXPPXXNPXSPP 813
P+P P P + +PP
Sbjct: 1134 PVPSGAPPVPKPSVAAPP 1151
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.9 bits (69), Expect = 0.13
Identities = 26/73 (35%), Positives = 27/73 (36%)
Frame = -3
Query: 812 GGEXGFXXGGXGGKGXXXPXFXGXXXXXXGGXPPPGGGXRXXXGEXRGXGGXLGAPLXXP 633
GG GF GG GG+G G G PGG G G GG G P
Sbjct: 205 GGFGGF--GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGP---- 258
Query: 632 XGGFFWGXXXWGG 594
GGF G GG
Sbjct: 259 -GGFGGGPGGHGG 270
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Frame = -3
Query: 722 GXPPPG----GGXRXXXGEXRGXGGXLGAPLXXPXGGFFWGXXXWGGAP 588
G PPPG GG GE GG G GGF G +GG P
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGG--FGGGPGGFEGGPGGFGGGP 244
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.17
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 592 APPHXXKPQKXPPXGXIKGAPKXPPXPRXSPXXXRXPPPGGGXP 723
APP P PP + P PP P P P P P
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +1
Query: 610 KPQKXPPXGXIKGAPKXPPXPRXSPXXXRXPPPGGGXPPXXXXXXPXXXGXXXPLP 777
+PQ P AP PP P P PP G P P P P
Sbjct: 1693 RPQSAAPPQM--SAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.23
Identities = 22/78 (28%), Positives = 26/78 (33%), Gaps = 5/78 (6%)
Frame = +1
Query: 595 PPHXXKPQKXPPXGX---IKGAPKXPPXPRXSPXXXRXPPPGG--GXPPXXXXXXPXXXG 759
PP + + PP G P PP PR + PP G PP P
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGR 374
Query: 760 XXXPLPPXPPXXNPXSPP 813
PL NP +PP
Sbjct: 375 QPPPLSSSRAVSNPPAPP 392
Score = 30.3 bits (65), Expect = 0.40
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = +1
Query: 625 PPXGXIKGAPKXPPXPRXSPXXXRXPPPGGGXPPXXXXXXPXXXGXXXPLPPXPPXXN 798
PP G + AP PP PR +P R PPP P P PP N
Sbjct: 354 PPQG--RSAPPPPP-PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGN 408
Score = 29.5 bits (63), Expect = 0.70
Identities = 18/63 (28%), Positives = 20/63 (31%)
Frame = +1
Query: 613 PQKXPPXGXIKGAPKXPPXPRXSPXXXRXPPPGGGXPPXXXXXXPXXXGXXXPLPPXPPX 792
P PP G+ PP R +P PPP P P PP PP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPP----PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Query: 793 XNP 801
P
Sbjct: 394 AIP 396
Score = 26.6 bits (56), Expect = 4.9
Identities = 20/72 (27%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Frame = +1
Query: 613 PQKXPPXGXIKGAPKXPPXPRXSPXXXRXPPPGGGXPPXXXXXXPXXXGXXXPL-----P 777
P PP + AP PP S P PP P P+ P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 778 PXPPXXNPXSPP 813
P PP P +PP
Sbjct: 448 PLPPSA-PIAPP 458
Score = 26.2 bits (55), Expect = 6.5
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Frame = +1
Query: 592 APPHXXKPQKXPPXGXIKGAPKXPPXPRXSPXXXRXPPPGGGXP--PXXXXXXPXXXGXX 765
APP P PP + GAP PP P +P PP G P P P
Sbjct: 427 APPSL--PPSAPPSLPM-GAPAAPPLPPSAPI---APPLPAGMPAAPPLPPAAPAPPPAP 480
Query: 766 XPLPPXP 786
P P P
Sbjct: 481 APAPAAP 487
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.1 bits (62), Expect = 0.92
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 6/56 (10%)
Frame = +1
Query: 640 IKGAPKXPPX---PRXSPXXXRXPPPG---GGXPPXXXXXXPXXXGXXXPLPPXPP 789
+K P PP P +P PPP GG PP G P PP PP
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP-PPPPP 783
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +1
Query: 610 KPQKXPPXGXIKGAPKXPPXPRXSPXXXRXPPPGGGXPPXXXXXXPXXXGXXXPLPPXPP 789
K PP I P P P P P GG PP P G P PP PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPP-----APIMGGPPP--PPPPPGVAGAGPPPPPPPP 782
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 595 PPHXXKPQKXPPXGXIKGAPKXPPXPRXSPXXXRXPPP 708
P P PP I G P PP P PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/65 (27%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
Frame = +1
Query: 625 PPXGXIKGAPKXPPXPRXS-PXXXRXPPPG-GGXPPXXXXXXPXXXGXXXPLPPXPPXXN 798
PP P+ P S P PPP PP P P P P +
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 799 PXSPP 813
P S P
Sbjct: 184 PPSAP 188
Score = 26.6 bits (56), Expect = 4.9
Identities = 21/76 (27%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Frame = +1
Query: 592 APPHXXKPQKXPPXGXIKGAPKXPPXPRXSPXXX-RXPPPGGGXPPXXXXXXPXXXGXXX 768
APP + + PP PP P +P + PP PP P
Sbjct: 129 APP-TPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 769 P-LPPXPPXXNPXSPP 813
P LP P P PP
Sbjct: 188 PSLPSAVPPMPPKVPP 203
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/72 (26%), Positives = 21/72 (29%), Gaps = 3/72 (4%)
Frame = +1
Query: 595 PPHXXKPQKX---PPXGXIKGAPKXPPXPRXSPXXXRXPPPGGGXPPXXXXXXPXXXGXX 765
PP KP + PP G PP P PPP P P
Sbjct: 210 PPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 269
Query: 766 XPLPPXPPXXNP 801
+PP P P
Sbjct: 270 EHMPPPPMHHEP 281
Score = 25.8 bits (54), Expect = 8.6
Identities = 18/72 (25%), Positives = 21/72 (29%), Gaps = 3/72 (4%)
Frame = +1
Query: 595 PPHXXKPQKX---PPXGXIKGAPKXPPXPRXSPXXXRXPPPGGGXPPXXXXXXPXXXGXX 765
PP +P + PP G PP P PPP P P
Sbjct: 223 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 282
Query: 766 XPLPPXPPXXNP 801
+PP P P
Sbjct: 283 EHMPPPPMHHEP 294
Score = 25.8 bits (54), Expect = 8.6
Identities = 18/72 (25%), Positives = 21/72 (29%), Gaps = 3/72 (4%)
Frame = +1
Query: 595 PPHXXKPQKX---PPXGXIKGAPKXPPXPRXSPXXXRXPPPGGGXPPXXXXXXPXXXGXX 765
PP +P + PP G PP P PPP P P
Sbjct: 236 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 295
Query: 766 XPLPPXPPXXNP 801
+PP P P
Sbjct: 296 EHMPPPPMHHEP 307
Score = 25.8 bits (54), Expect = 8.6
Identities = 18/72 (25%), Positives = 21/72 (29%), Gaps = 3/72 (4%)
Frame = +1
Query: 595 PPHXXKPQKX---PPXGXIKGAPKXPPXPRXSPXXXRXPPPGGGXPPXXXXXXPXXXGXX 765
PP +P + PP G PP P PPP P P
Sbjct: 249 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 308
Query: 766 XPLPPXPPXXNP 801
+PP P P
Sbjct: 309 EHMPPPPMHHEP 320
Score = 25.8 bits (54), Expect = 8.6
Identities = 18/72 (25%), Positives = 21/72 (29%), Gaps = 3/72 (4%)
Frame = +1
Query: 595 PPHXXKPQKX---PPXGXIKGAPKXPPXPRXSPXXXRXPPPGGGXPPXXXXXXPXXXGXX 765
PP +P + PP G PP P PPP P P
Sbjct: 262 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 321
Query: 766 XPLPPXPPXXNP 801
+PP P P
Sbjct: 322 EHMPPPPMHHEP 333
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 6.5
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -3
Query: 812 GGEXGFXXGGXGGKGXXXPXFXGXXXXXXGGXPPPGGGXRXXXGEXRGXGGXLG 651
GG GF G G G G GG GG G G GG G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,457,400
Number of Sequences: 5004
Number of extensions: 15086
Number of successful extensions: 108
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 466510270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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