Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_A11
(921 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1125 + 31085106-31085714 34 0.18
12_02_0674 - 21745321-21746223,21746229-21747608 32 0.56
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 31 0.97
04_03_0904 + 20717005-20718087 31 0.97
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 2.3
08_01_0526 + 4575160-4576719 30 3.0
12_01_0011 + 90859-91169,92075-92622,92701-92803,92899-92998,934... 29 5.2
11_01_0011 + 95001-95311,96217-96764,96843-96945,97041-97140,975... 29 5.2
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 5.2
05_01_0152 + 1008642-1008719,1008797-1009300 29 5.2
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 5.2
03_01_0515 - 3864796-3865425 29 5.2
08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004 29 6.9
08_01_0170 - 1440908-1441072,1441539-1441581,1442155-1442619,144... 29 6.9
06_01_0486 - 3455030-3455770 29 6.9
01_01_0070 - 542603-542686,542803-543441 29 6.9
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 28 9.1
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 28 9.1
01_05_0490 + 22672241-22674679 28 9.1
>04_04_1125 + 31085106-31085714
Length = 202
Score = 33.9 bits (74), Expect = 0.18
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 759 TXPTPXPLTXKSXAPPP*XXSPXSXHXXPPXXPVPXXPT 875
T PTP P T PPP +P + P P P PT
Sbjct: 71 TPPTPTPWTPTPATPPPTPATPATPTTPPTPAPAPSTPT 109
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 32.3 bits (70), Expect = 0.56
Identities = 25/76 (32%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Frame = +2
Query: 704 PLLXXXIXLR----SXXPAXSKYXPNAXTPNP*IXXPXPIXXLSPLPTPXSPXXTCSPXP 871
PLL I R S P+ SK P TP P P P+ +SP SP P
Sbjct: 389 PLLKRPIDCRTNTCSALPSSSKPAPKKITPTPPTLAPPPL--ISPKEETPSPSPYIEPPK 446
Query: 872 HSDPNXXAXLXPIXXS 919
S P L P+ S
Sbjct: 447 SSPPPVKFPLPPVPLS 462
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 31.5 bits (68), Expect = 0.97
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 765 PTPXPLTXKSXAPPP*XXSPXSXHXXPPXXP--VPXXPTXTXIXXPXWXPLXPP 920
PTP T PPP P H PP P +P P P P PP
Sbjct: 63 PTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPLPP 116
>04_03_0904 + 20717005-20718087
Length = 360
Score = 31.5 bits (68), Expect = 0.97
Identities = 26/99 (26%), Positives = 32/99 (32%), Gaps = 1/99 (1%)
Frame = +3
Query: 627 KSPPXCPREXXHSXLKPVPGPWXXXXXSSXXPSXYAAXFLXXLSTXPTPXPLTXKSXAPP 806
+ PP + ++ KP P P P Y T PTP T P
Sbjct: 62 EKPPKEHKPPAYTPPKPTPTPPTYTPTPKPTPPPYTPKPTPPAHT-PTPPTYTPTPTPPK 120
Query: 807 P*XXSPXSXHXXPPXXPVPXXPTXT-XIXXPXWXPLXPP 920
P +P + P P P PT T P P PP
Sbjct: 121 P---TPPTYKPQPKPTPAPYTPTPTPPTYKPQPKPTPPP 156
Score = 28.3 bits (60), Expect = 9.1
Identities = 24/97 (24%), Positives = 31/97 (31%)
Frame = +3
Query: 627 KSPPXCPREXXHSXLKPVPGPWXXXXXSSXXPSXYAAXFLXXLSTXPTPXPLTXKSXAPP 806
+ PP + H KP P + P + PTP P T K PP
Sbjct: 45 EKPPKEHKPPHHHEPKPEKPPKEHKPPAYTPPKPTPTPPTYTPTPKPTPPPYTPK-PTPP 103
Query: 807 P*XXSPXSXHXXPPXXPVPXXPTXTXIXXPXWXPLXP 917
+P + + P P P PT P P P
Sbjct: 104 AHTPTPPT-YTPTPTPPKPTPPTYKPQPKPTPAPYTP 139
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = +3
Query: 765 PTPXPLTXKSXAPPP*XXSPXS--XHXXPPXXPVPXXPTXTXIXXPXWXPLXPP 920
P P P + APPP SP + PP P P P P P PP
Sbjct: 321 PPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPP 374
>08_01_0526 + 4575160-4576719
Length = 519
Score = 29.9 bits (64), Expect = 3.0
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 191 ISGPGSGGGANQRSHN 238
++G G+GGG N+RSHN
Sbjct: 503 VAGAGAGGGGNRRSHN 518
>12_01_0011 +
90859-91169,92075-92622,92701-92803,92899-92998,
93453-93529,93608-93686,94108-94226,94330-94423
Length = 476
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 511 APVNPAXINTXHGKYPVTLNLPCVPA 588
AP+NP+ +N G YPV LP A
Sbjct: 180 APINPSDLNRVEGVYPVRPPLPAAVA 205
>11_01_0011 +
95001-95311,96217-96764,96843-96945,97041-97140,
97595-97671,97750-97828,98250-98368,98472-98565
Length = 476
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 511 APVNPAXINTXHGKYPVTLNLPCVPA 588
AP+NP+ +N G YPV LP A
Sbjct: 180 APINPSDLNRVEGVYPVRPPLPAAVA 205
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +3
Query: 756 STXPTPXPLTXKSXAPPP*XXSPXSXHXXPPXXPVPXXP 872
+T P P PL+ PPP P P P+P P
Sbjct: 1167 ATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQP 1205
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = +3
Query: 765 PTPXPLTXKSXAPPP*XXSPXSXHXXPPXXPVPXXPTXTXIXXPXWXPLXPP 920
P+P P T PPP SP S PP P+P P P P+ PP
Sbjct: 1162 PSPPPATP----PPPPPLSP-SLPPPPPPPPLPSGPPPQPAPPP--LPIQPP 1206
>05_01_0152 + 1008642-1008719,1008797-1009300
Length = 193
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 881 GXSGGXGNRXXGGXXVXGXGRGVLWXXXXGFXG*GXRRWXST 756
G GG G R GG V G G LW G RRW T
Sbjct: 30 GKEGGGGGRR-GGAGVGGGGWWRLWLAGVRVGDCGCRRWRLT 70
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/54 (27%), Positives = 18/54 (33%)
Frame = +3
Query: 756 STXPTPXPLTXKSXAPPP*XXSPXSXHXXPPXXPVPXXPTXTXIXXPXWXPLXP 917
S P P P PPP + PP P P P+ + P P P
Sbjct: 346 SNAPPPPPPPPPPPPPPPPPKLNTAPKPPPPPPPPPSVPSNNNLPKPAEPPAVP 399
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.1 bits (62), Expect = 5.2
Identities = 28/98 (28%), Positives = 31/98 (31%), Gaps = 4/98 (4%)
Frame = +3
Query: 630 SPPXCPREXXHSXLKPVPGPWXXXXXSSXXPSXYAAXFLXXLSTXPTPXPLTXKSXAPPP 809
SPP P E L P P +S P A L P P P S PPP
Sbjct: 38 SPPSPPTEASPPPLAPPPS------VTSSPPPPAAGP----LMPPPPPPPSVTSSPPPPP 87
Query: 810 *XXSP----XSXHXXPPXXPVPXXPTXTXIXXPXWXPL 911
P S PP P P + P W P+
Sbjct: 88 LPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPPAWSPV 125
>08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004
Length = 681
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 7/31 (22%)
Frame = -3
Query: 169 YQLTFWFFSSSRSFLQK-------PRPPKKP 98
+QLT W+F SS SF QK P PP P
Sbjct: 253 HQLTSWYFKSSSSFEQKLAAKVASPPPPSSP 283
>08_01_0170 -
1440908-1441072,1441539-1441581,1442155-1442619,
1442714-1444149
Length = 702
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 7/31 (22%)
Frame = -3
Query: 169 YQLTFWFFSSSRSFLQK-------PRPPKKP 98
+QLT W+F SS SF QK P PP P
Sbjct: 256 HQLTSWYFKSSSSFEQKLAAKVASPPPPSSP 286
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +3
Query: 765 PTPXPLTXKSXAPP-P*XXSPXSXHXXPPXXPVPXXPTXTXIXXPXWXPLXPP 920
P+P P PP P P PP P P P+ P P PP
Sbjct: 94 PSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSPPPYVPPPTPPSPPP 146
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +3
Query: 768 TPXPLTXKSXAPPP*XXSPXSXHXXPPXXPVPXXPTXTXIXXPXWXPLXPP 920
TP P T K PPP P + PP P P P P P PP
Sbjct: 81 TPPPPTPKKAPPPPVTPPPVT---PPPVTPPPVSPPPA-TPPPALPPSTPP 127
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +3
Query: 765 PTPXPLTXKSXAPPP*XXSPXSXHXXPPXXPVPXXPTXTXIXXPXWXPLXP 917
P P P APPP P S PP P P P + P PL P
Sbjct: 587 PEPSPPPAPKAAPPP--PPPKSTGPGPPRPPPPAMPGSSKTRPP--PPLKP 633
>01_06_0823 +
32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +3
Query: 765 PTPXPLTXKSXAPPP*XXSPXSXHXXPPXXPVPXXP 872
P+P P S AP P SP S PP P P P
Sbjct: 20 PSPAPSPSSSSAPAP--ASPRSPVPPPPGVPPPPPP 53
>01_05_0490 + 22672241-22674679
Length = 812
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +3
Query: 765 PTPXPLTXKSXAPPP*XXSPXSXHXXPPXXPVPXXPTXTXIXXPXWXPLXPP 920
P P P T +S PP P PP P P + PL PP
Sbjct: 643 PPPPPTTRRSRKPPQPPSRPAPPPPPPPQQQPPFYPRRAVVYYT--YPLPPP 692
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,943,848
Number of Sequences: 37544
Number of extensions: 343231
Number of successful extensions: 1430
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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