Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_A10
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083...    38   0.011
05_06_0190 - 26260743-26261198,26261261-26261355,26261425-26262181     30   2.1  
02_02_0625 - 12339623-12339707,12339938-12340062,12340844-123409...    30   2.1  
07_01_0756 + 5819367-5820038,5820847-5821005                           30   2.8  
03_06_0386 + 33555682-33556344,33557138-33557299                       30   2.8  
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581...    29   3.8  

>05_07_0354 -
           29507068-29507170,29507406-29507431,29508264-29508301,
           29508722-29508825,29509005-29509024,29509251-29509299,
           29510319-29510406,29510463-29510562,29510660-29510737,
           29512688-29512804,29513718-29513821,29514497-29514569,
           29514904-29514981,29515091-29515215,29515278-29515341,
           29515439-29515597,29515950-29516048,29516496-29516624,
           29517010-29517075,29517160-29517304,29517379-29517500,
           29517683-29517838,29517918-29518029,29518891-29519036,
           29519148-29519252,29519391-29519540,29519703-29519776,
           29519902-29520055,29520142-29520408
          Length = 1016

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
 Frame = +3

Query: 42  DLIRHVELHLDNFVKFTPTCYLKTYSFLTMSNLFKLKLSALGHPNPEFFNCEDEKEYRSV 221
           DLI+   + ++N  +F P   +  ++ LT   L +    A+G PN          ++R +
Sbjct: 151 DLIKKFNIQVNNLTQFLPQDRVCEFAKLTPIQLLEETEKAVGDPNLPI-------QHRQL 203

Query: 222 VLWLEDQKIRHYKIEDRE----GLRNIDSDFWKEAYNTYQKDLVSPAAEGTLNEQLNWLL 389
           +   ++ KI    ++ +E     L+ ++++  K+     Q+D +   AE  + ++L WL 
Sbjct: 204 IDRSKELKILQVAVKQKEQTLNNLKALNAELEKDVERVRQRDRLLKKAE-LMKKKLPWLK 262

Query: 390 SYAVRLEY--ADNVDKYKNAKVEEXKKAPNVVSSNPLDXLDFSSQAFKAGVXRV 545
               + EY  A   +K +  K+EE  K     S  P++ L     +  +   R+
Sbjct: 263 YDMKKKEYKEAQEKEKTEKKKMEEVAKIWE-DSKGPVEELKKKKMSHTSNTKRI 315


>05_06_0190 - 26260743-26261198,26261261-26261355,26261425-26262181
          Length = 435

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 192 CEDE--KEYRSVVLWLEDQKIRHYKIEDREGLRNIDSDFWKEAY 317
           C DE  K + S++L+    +++H  +       ++D D WKE Y
Sbjct: 221 CRDERVKSHFSLILFYNGDELKHETVATFRDRCDVDEDTWKELY 264


>02_02_0625 -
           12339623-12339707,12339938-12340062,12340844-12340996,
           12342037-12342102,12343374-12343443,12343523-12343593,
           12343664-12343795,12344042-12344130,12344189-12344270,
           12344743-12344811,12345641-12345730,12345856-12345918,
           12346158-12346217
          Length = 384

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 21/89 (23%), Positives = 46/89 (51%)
 Frame = +3

Query: 288 IDSDFWKEAYNTYQKDLVSPAAEGTLNEQLNWLLSYAVRLEYADNVDKYKNAKVEEXKKA 467
           +++DF        +KD+++ ++ G + E L+W++     L+    V+   ++K    K A
Sbjct: 109 LEADFVPRQIAYKEKDILTNSS-GFVTESLDWVIFRESLLQMLLGVEDGISSKEGSAKSA 167

Query: 468 PNVVSSNPLDXLDFSSQAFKAGVXRVCTV 554
           P++ SS  +   +F  +A  A V ++ T+
Sbjct: 168 PDLESSLAIISFEFERKAL-ASVQKLFTM 195


>07_01_0756 + 5819367-5820038,5820847-5821005
          Length = 276

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +3

Query: 69  LDNFVKFTPTCYLKTYSFLT 128
           L NFVK T  C +KTY FLT
Sbjct: 219 LGNFVKATFDCLMKTYGFLT 238


>03_06_0386 + 33555682-33556344,33557138-33557299
          Length = 274

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +3

Query: 69  LDNFVKFTPTCYLKTYSFLT 128
           L NFVK T  C +KTY FLT
Sbjct: 216 LGNFVKATFDCLMKTYGFLT 235


>01_06_0575 -
           30357556-30357582,30357698-30357944,30358039-30358161,
           30358275-30358301,30358475-30358633,30359764-30359948,
           30360225-30360293,30360432-30362354,30363018-30363339,
           30363506-30363543
          Length = 1039

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
 Frame = +3

Query: 330 KDLVSPAAEGTLNEQLNWLLSYAVRLEYADNVDKYKNAKVEEXKKAPNVV--SSNPLDXL 503
           +DLV+P  E T N  L W L  A+     D   K     +E      N V  SS P+  L
Sbjct: 784 QDLVAPVFEETKNRSLGWSLDDAIGPRILDFGSKVAGHGLEMSTNESNCVRASSGPVPVL 843

Query: 504 DFSS 515
           +  S
Sbjct: 844 ETRS 847


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,386,189
Number of Sequences: 37544
Number of extensions: 296820
Number of successful extensions: 626
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)