Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_A10
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47075-2|CAA87380.1|  253|Caenorhabditis elegans Hypothetical pr...    42   4e-04
AF016682-9|AAB66189.3|  441|Caenorhabditis elegans Hypothetical ...    30   1.9  
AF016682-8|AAO38605.1|  422|Caenorhabditis elegans Hypothetical ...    30   1.9  
U70856-2|AAB09164.1|  461|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr...    29   5.8  

>Z47075-2|CAA87380.1|  253|Caenorhabditis elegans Hypothetical
           protein E02H1.5 protein.
          Length = 253

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
 Frame = +3

Query: 150 KLSALGHPNPEFFNCEDEKEYRSVVLWLEDQKIRHYKIEDR----EGLRNIDSDFWKEAY 317
           KL A+ +   ++ N +D+ E R +++ +E+    H K  D+    + L   D   W    
Sbjct: 5   KLRAVEYDR-DYINFDDDNEIRRLIVTVEEA---HLKCRDQNWSAQMLDEQDVAKWTVEL 60

Query: 318 NTYQKDLVSPAAEGTLNEQLNWLLSYAVRLEYADNVDKYKNAKVEEXKKAPNVV-----S 482
             Y  +  +P+        ++++L+ AV+  Y       +       ++A  V+     S
Sbjct: 61  EKYFTEFGAPSGCSRA-AAIDYVLNAAVQKIYEQKGGDTELCSSRLREQAEKVLEAHRDS 119

Query: 483 SNPLDXLDFSSQAFKAGVXRVCTVASIGP-HPDPKI 587
            NPL+ LD+SS  F      +C++  I   HPDPK+
Sbjct: 120 QNPLNRLDYSSPNFAENARALCSILGISAHHPDPKV 155


>AF016682-9|AAB66189.3|  441|Caenorhabditis elegans Hypothetical
           protein T07D3.9a protein.
          Length = 441

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +3

Query: 48  IRHVELHLDNFVKFTPTCYLKTYSFLTMSNLFKL-KLSALGHP 173
           I HV LH D+FV +T   Y++     T+S+  KL +L+ L HP
Sbjct: 345 IGHV-LHFDSFVTYTDGKYVQVKVAATISDQHKLPELAKLNHP 386


>AF016682-8|AAO38605.1|  422|Caenorhabditis elegans Hypothetical
           protein T07D3.9b protein.
          Length = 422

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +3

Query: 48  IRHVELHLDNFVKFTPTCYLKTYSFLTMSNLFKL-KLSALGHP 173
           I HV LH D+FV +T   Y++     T+S+  KL +L+ L HP
Sbjct: 300 IGHV-LHFDSFVTYTDGKYVQVKVAATISDQHKLPELAKLNHP 341


>U70856-2|AAB09164.1|  461|Caenorhabditis elegans Hypothetical
           protein F57F4.1 protein.
          Length = 461

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +3

Query: 63  LHLDNFVKFTPTCYLKTYSFLTMSNLFKL-KLSALGHP 173
           LHLD+FV +T   YL+     ++S+  KL +L+ L HP
Sbjct: 369 LHLDSFVTYTDGKYLQMKVAASISDQNKLPELAKLNHP 406


>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical
           protein C09H6.1b protein.
          Length = 1309

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = +3

Query: 75  NFVKFTPTCYL-KTYSFLTMSNLFKLKLSALGHPNPEFFNCEDEKEY-RSVVLWLEDQKI 248
           N  K  PT  +  T     + N  + K+  L         C +E    +S+ LW + +K+
Sbjct: 630 NHEKLHPTVVVANTNEAPVVKNEIEAKVEVLSKTVSSPVECTEESSLSKSIQLWCQREKL 689

Query: 249 RHYKIEDREGLRNID 293
           RH +++++   + ID
Sbjct: 690 RHPELDEQFTRKMID 704


>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical
           protein C09H6.1a protein.
          Length = 1311

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = +3

Query: 75  NFVKFTPTCYL-KTYSFLTMSNLFKLKLSALGHPNPEFFNCEDEKEY-RSVVLWLEDQKI 248
           N  K  PT  +  T     + N  + K+  L         C +E    +S+ LW + +K+
Sbjct: 630 NHEKLHPTVVVANTNEAPVVKNEIEAKVEVLSKTVSSPVECTEESSLSKSIQLWCQREKL 689

Query: 249 RHYKIEDREGLRNID 293
           RH +++++   + ID
Sbjct: 690 RHPELDEQFTRKMID 704


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,084,522
Number of Sequences: 27780
Number of extensions: 269391
Number of successful extensions: 652
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)