Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_A07
         (832 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     30   2.0  
05_02_0119 + 6793292-6793613,6795793-6795952,6796416-6796458,679...    29   3.4  
10_07_0194 - 13957709-13957925,13960065-13960129,13960281-139604...    29   4.5  
03_02_0738 - 10824121-10825572                                         29   4.5  
07_01_1201 - 11419851-11419913,11420090-11420311                       29   6.0  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.0  
12_02_0299 - 17051570-17052474,17053542-17053755                       28   7.9  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   7.9  
02_02_0045 - 6327123-6327211,6327616-6327787                           28   7.9  

>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -2

Query: 642 RGASRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 514
           R  SRGK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 22  RVLSRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>05_02_0119 +
           6793292-6793613,6795793-6795952,6796416-6796458,
           6797015-6797335
          Length = 281

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +1

Query: 571 RSSQRWRNPTGL*RYQAFPPGSSPRALSWFRPCPLTGIPVPPFLPSGSVAL 723
           R S ++R+P     YQA    +  +   W RPC    IP+ P LP G   L
Sbjct: 173 RLSLKFRHP-----YQAKFDSNQSKTSKWLRPCLREAIPITP-LPIGGTQL 217


>10_07_0194 -
           13957709-13957925,13960065-13960129,13960281-13960454,
           13960847-13960889,13961081-13961225,13961305-13961413,
           13961694-13961822,13961935-13962031,13962639-13962703,
           13963275-13963439
          Length = 402

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
 Frame = +1

Query: 628 PGSSPRALSWFRPCPLTGIPVPPFL-PSGSVALSHXSRLXVSXFRVXSFAP 777
           PG S   +   R C   GIPV P   PS ++A    S L    F    F P
Sbjct: 143 PGISDPGMELARLCATEGIPVIPIPGPSAAIAALSASGLPTDEFTFVGFLP 193


>03_02_0738 - 10824121-10825572
          Length = 483

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +1

Query: 625 PPGSSPRALSWFRPCPLTGIPVPPFLP 705
           PP SSP  LS+  P P    P PP LP
Sbjct: 83  PPSSSPPPLSFPPPPPPPSSPPPPALP 109


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +1

Query: 580 QRWRN--PTGL*RYQAFPPGSSPRALSWFRPCPLTGIPVPPFLPS 708
           Q+WR+  PTG   + +FP G+ P A    +P P    P  P  PS
Sbjct: 27  QQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAP-DRQPATPLFPS 70


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 349 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 504
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 628 PGSSPRALSWFRPCPLTGIPVPPFLP 705
           P  +PR   WF P P    P PPFLP
Sbjct: 218 PFCTPRP--WFPPIPFLTPPPPPFLP 241


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 298 NESAN---ARGEAVCVLGALPLPRSLTRCAR 381
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>02_02_0045 - 6327123-6327211,6327616-6327787
          Length = 86

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 664 PCPLTGIPVPPFLPSG 711
           P P+ G+P PP LP G
Sbjct: 34  PTPIAGVPSPPILPDG 49


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,013,140
Number of Sequences: 37544
Number of extensions: 428455
Number of successful extensions: 1339
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)