Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_P18
(962 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.30
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.53
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.8
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 3.7
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 4.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.9
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.5
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 6.5
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 6.5
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 6.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 8.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.6
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +3
Query: 846 PXXXPPPPXXXPXXXXXXXKKPXRXPPPPQXXXPPXXTP 962
P PPP P ++P R PP P+ PP P
Sbjct: 150 PPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPP 188
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 846 PXXXPPPPXXXPXXXXXXXKKPXRXPPPPQXXXPPXXTP 962
P PPPP P P PPPP PP P
Sbjct: 42 PLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -2
Query: 961 GVXXGGXXXWGGGGXRXGFFXXXXXXXGXXXGGGG 857
G GG WGGGG G + G GGGG
Sbjct: 106 GNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGG 140
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -2
Query: 961 GVXXGGXXXWGG--GGXRXGFFXXXXXXXGXXXGGGGXWXG 845
G GG WGG GG R G G GGGG W G
Sbjct: 79 GGNGGGRGDWGGNGGGGRGG--GGRGDWGGNNNGGGGNWGG 117
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 946 GXXXWGGGGXRXGFFXXXXXXXGXXXG-GGGXWXG 845
G WGGGG G+ G G GGG W G
Sbjct: 36 GGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGG 70
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 310 PXPPPXGGXPPXVFFFXPXXPPPLXXXP 227
P PPP GG PP P PPP P
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 310 PXPPPXGGXPPXVFFFXPXXPPPLXXXP 227
P PPP GG PP P PPP P
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 310 PXPPPXGGXPPXVFFFXPXXPPPLXXXP 227
P PPP GG PP P PPP P
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 322 TXPXPXPPPXGGXPPXVFFFXPXXPPP 242
T P PPP GG PP P PPP
Sbjct: 739 TGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 316 PXPXPPPXGGXPPXVFFFXPXXPPP 242
P P PPP GG PP P PPP
Sbjct: 758 PPPPPPPPGGCPP-----PPPPPPP 777
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 322 TXPXPXPPPXGGXPPXVFFFXPXXPPP 242
T P PPP GG PP + P PPP
Sbjct: 723 TGGPPPPPPPGGLPP-ITGGPPPPPPP 748
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 846 PXXXPPPPXXXPXXXXXXXKKPXRXPPPPQXXXPPXXTP 962
P PPP P P PPPP PP P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 322 TXPXPXPPPXGGXPPXVFFFXPXXPPP 242
T P PPP GG PP P PPP
Sbjct: 739 TGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 316 PXPXPPPXGGXPPXVFFFXPXXPPP 242
P P PPP GG PP P PPP
Sbjct: 758 PPPPPPPPGGCPP-----PPPPPPP 777
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 322 TXPXPXPPPXGGXPPXVFFFXPXXPPP 242
T P PPP GG PP + P PPP
Sbjct: 723 TGGPPPPPPPGGLPP-ITGGPPPPPPP 748
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 846 PXXXPPPPXXXPXXXXXXXKKPXRXPPPPQXXXPPXXTP 962
P PPP P P PPPP PP P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 322 TXPXPXPPPXGGXPPXVFFFXPXXPPP 242
T P PPP GG PP P PPP
Sbjct: 322 TGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 316 PXPXPPPXGGXPPXVFFFXPXXPPP 242
P P PPP GG PP P PPP
Sbjct: 341 PPPPPPPPGGCPP-----PPPPPPP 360
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 322 TXPXPXPPPXGGXPPXVFFFXPXXPPP 242
T P PPP GG PP + P PPP
Sbjct: 306 TGGPPPPPPPGGLPP-ITGGPPPPPPP 331
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 846 PXXXPPPPXXXPXXXXXXXKKPXRXPPPPQXXXPPXXTP 962
P PPP P P PPPP PP P
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 846 PXXXPPPPXXXPXXXXXXXKKPXRXPPPPQXXXPPXXTP 962
P PPPP P PPP PP TP
Sbjct: 463 PKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATP 501
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 846 PXXXPPPPXXXPXXXXXXXKKPXRXPPPPQXXXPPXXTP 962
P PPPP P PPP PP TP
Sbjct: 470 PKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATP 508
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +3
Query: 858 PPPPXXXPXXXXXXXKKPXRXPPPPQXXXPPXXTP 962
PPPP P R PPPP+ P P
Sbjct: 44 PPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPP 78
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +3
Query: 858 PPPPXXXPXXXXXXXKKPXRXPPPPQXXXPPXXTP 962
PPPP P R PPPP+ P P
Sbjct: 107 PPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 141
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +3
Query: 858 PPPPXXXPXXXXXXXKKPXRXPPPPQXXXPPXXTP 962
PPPP P R PPPP+ P P
Sbjct: 138 PPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 172
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +3
Query: 858 PPPPXXXPXXXXXXXKKPXRXPPPPQXXXPPXXTP 962
PPPP P R PPPP+ P P
Sbjct: 169 PPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPP 203
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +3
Query: 858 PPPPXXXPXXXXXXXKKPXRXPPPPQXXXPPXXTP 962
PPPP P R PPPP+ P P
Sbjct: 200 PPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPP 234
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 861 PPPXXXPXXXXXXXKKPXRXPPPPQXXXPPXXTP 962
PPP P P PPPP PP P
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -2
Query: 949 GGXXXWGGGGXRXGFFXXXXXXXGXXXGGGGXWXG 845
GG WG GG G+ G GGGG W G
Sbjct: 50 GGGPGWGRGGGGSGWGGGRGGGWG-NNGGGGNWGG 83
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 846 PXXXPPPPXXXPXXXXXXXKKPXRXPPPPQXXXPP 950
P PPPP P P PPP PP
Sbjct: 96 PIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPP 130
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 846 PXXXPPPPXXXPXXXXXXXKKPXRXPPPPQXXXPP 950
P PPPP P P PPP PP
Sbjct: 119 PIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPP 153
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 846 PXXXPPPPXXXPXXXXXXXKKPXRXPPPPQXXXPP 950
P PPPP P P PPP PP
Sbjct: 369 PIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPP 403
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 858 PPPPXXXPXXXXXXXKKPXRXPPPPQXXXPPXXTP 962
PPPP P P PPPP P P
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 858 PPPPXXXPXXXXXXXKKPXRXPPPPQXXXPPXXTP 962
PPPP P P PPPP P P
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVP 1373
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,676,602
Number of Sequences: 27780
Number of extensions: 151497
Number of successful extensions: 1197
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2490012644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -