Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_P15
         (893 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YZ07 Cluster: Putative uncharacterized protein; n=4; ...    40   0.065
UniRef50_A2FE70 Cluster: Beige/BEACH domain containing protein; ...    33   7.4  
UniRef50_A0C329 Cluster: Chromosome undetermined scaffold_146, w...    33   9.8  

>UniRef50_Q4YZ07 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 318

 Score = 40.3 bits (90), Expect = 0.065
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
 Frame = -2

Query: 736 LKQFIEFYFRRFYY--VVINAY--VFLMFLVQSLSFNFDTMLTNS*HHYHCFRNYYVSIN 569
           +  F  FYFR+ +   +V N Y  +F ++ V     N D+   +    +  F+  Y  IN
Sbjct: 114 ITSFFTFYFRKIFIMNIVPNNYDNLFSLYKVFQTIKNIDSNNISVLEFFEKFQKTYFIIN 173

Query: 568 NIL*GFDLSQFGIKIRFFLCNYDDCFMIYIL 476
                 D+ QF + + FF+ N  DCF+I+ +
Sbjct: 174 KFF--EDIPQFFLCLLFFILNGKDCFLIFTM 202


>UniRef50_A2FE70 Cluster: Beige/BEACH domain containing protein;
           n=2; Eukaryota|Rep: Beige/BEACH domain containing
           protein - Trichomonas vaginalis G3
          Length = 2431

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +1

Query: 301 KVCFTHSIVDNVLQFQLRMCFVLP*NNFIYELEILDLFSVSSVESDYFKYKFNDMHRYV- 477
           KVCF + ++D  L F + +    P N  +   + +DLF +S +E+     K  D+ R + 
Sbjct: 708 KVCFWYKLIDKCLDFAMGLIQFSPENAKMANKDEVDLFLLSQLENSSEVEKILDLFREIS 767

Query: 478 -IYKS 489
            IY S
Sbjct: 768 CIYSS 772


>UniRef50_A0C329 Cluster: Chromosome undetermined scaffold_146,
           whole genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_146,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 364

 Score = 33.1 bits (72), Expect = 9.8
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 263 KTKQSILTNSGYIKCVLLILSWIMCFNF 346
           +T + IL NSGY  CV LI S+++ F F
Sbjct: 335 QTNEQILLNSGYFNCVGLINSYMLLFKF 362


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 811,606,408
Number of Sequences: 1657284
Number of extensions: 16306080
Number of successful extensions: 37815
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37778
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)