Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_P15
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0034 - 12539201-12540439                                         29   5.0  
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002...    29   5.0  
06_01_0656 - 4759627-4759799,4759880-4759968,4760657-4760775           28   8.7  
02_01_0385 + 2783387-2783695,2784149-2785082,2785206-2785309,278...    28   8.7  

>12_02_0034 - 12539201-12540439
          Length = 412

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 739 DVSSAELCWYFLSPLI 786
           DVS  ELCWYFL+ L+
Sbjct: 395 DVSYDELCWYFLTSLL 410


>04_04_1466 -
           33799104-33799229,33799659-33799669,33800052-33800200,
           33800261-33800299,33800690-33800746,33800839-33801628,
           33801705-33801980,33802051-33802117,33802211-33802285,
           33802618-33802812,33802927-33803076,33803152-33803522,
           33804070-33804193,33804246-33804275,33804306-33804417,
           33804919-33804985,33805138-33805180,33805768-33805872
          Length = 928

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 733 LRDVSSAELCWYFLSPLINSYFVXIAFWYPYTSI 834
           L+D + A L WY LS   +  ++   F YP++ +
Sbjct: 824 LKDTAFAYLLWYLLSEETSGSYISYPFTYPFSYV 857


>06_01_0656 - 4759627-4759799,4759880-4759968,4760657-4760775
          Length = 126

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = -3

Query: 216 TNHLQIAVRGTRVVADPHARDRETACVTVLGKKVKLEWVQAVPDACVEP 70
           T H ++AV+G R   +PH   R+    T      K+   Q V     EP
Sbjct: 10  TYHGELAVQGCRPTEEPHGEQRDGTMYTSTSCVCKVSVAQLVKFLMAEP 58


>02_01_0385 +
           2783387-2783695,2784149-2785082,2785206-2785309,
           2785402-2785486,2785517-2787578,2787732-2787753,
           2788157-2788327,2791473-2791517,2792558-2793874,
           2793962-2794012,2794090-2794188,2794352-2794504,
           2794554-2794571
          Length = 1789

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +1

Query: 286 KQRVHKVCFTHSIVDNVLQFQLRMCFVLP*NNFIYELEILDLFSVSSVESDYFKYKFNDM 465
           K  + K  F+H++   VL    R    LP  + +Y+L++L     SS+    F   FN +
Sbjct: 521 KMHLPKQAFSHTLCLRVLDLGGRQVSELP--SSVYKLKLLRYLDASSLRISSFSKSFNHL 578


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,553,075
Number of Sequences: 37544
Number of extensions: 392723
Number of successful extensions: 744
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)