Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_P12
         (932 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0080 + 587674-588510                                             31   1.7  
02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643...    30   2.3  
04_04_0799 + 28143878-28145042,28145127-28145290,28146008-281460...    30   3.0  
02_05_0686 - 30900748-30902167,30903442-30904742                       30   3.0  
08_01_0059 - 394001-394708                                             29   4.0  
02_05_0962 + 33114226-33114684,33114806-33114853,33115166-331152...    29   4.0  
01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983     29   4.0  
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969...    29   7.0  

>07_01_0080 + 587674-588510
          Length = 278

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 733 PPPX*KNXGXPPXNPPXPPXFXPP 804
           PPP   + G PP  PP PP   PP
Sbjct: 94  PPPPPPSSGSPPPPPPPPPPPPPP 117



 Score = 28.7 bits (61), Expect = 7.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 733 PPPX*KNXGXPPXNPPXPPXFXPP 804
           PPP   +   PP  PP PP   PP
Sbjct: 95  PPPPPSSGSPPPPPPPPPPPPPPP 118


>02_02_0059 -
           6432945-6433115,6433975-6434061,6434585-6434787,
           6435281-6435392,6435473-6435517,6435622-6435726,
           6435946-6435996,6436026-6436103,6437258-6437313,
           6437784-6437853,6438288-6438392,6438525-6438637,
           6439354-6439534,6439635-6440390
          Length = 710

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = +1

Query: 763 PPXNPPXPPXFXPPXXKKNXXXXXXRGRXXXPXPPG 870
           PP  PP PP   P    +        GR   P PPG
Sbjct: 34  PPLPPPPPPGMVPVEGDRLLGLIRDHGRPPFPPPPG 69


>04_04_0799 +
           28143878-28145042,28145127-28145290,28146008-28146070,
           28146268-28146491,28146850-28147555
          Length = 773

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -1

Query: 503 FXXGXGXGXPKXXPPXPGGGGXFFXXKXXPPPPXXG 396
           +  G G G     PP P     F+  +  PPPP  G
Sbjct: 129 YAYGYGTGPAFAYPPPPASSLQFYYARSRPPPPSVG 164


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 16/50 (32%), Positives = 16/50 (32%)
 Frame = +1

Query: 733 PPPX*KNXGXPPXNPPXPPXFXPPXXKKNXXXXXXRGRXXXPXPPGXXSP 882
           PPP  K     P  PP P    PP   K             P PP   SP
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP 364


>08_01_0059 - 394001-394708
          Length = 235

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 733 PPPX*KNXGXPPXNPPXPPXFXPP 804
           PPP  +    PP  PP PP   PP
Sbjct: 3   PPPPPRRAPPPPATPPPPPRRAPP 26


>02_05_0962 +
           33114226-33114684,33114806-33114853,33115166-33115286,
           33115760-33116008,33116149-33116302,33116493-33116985,
           33117524-33117596,33118285-33118343
          Length = 551

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 453 GGGGXFFXXKKXPPPPP 403
           GGGG F   +  PPPPP
Sbjct: 56  GGGGGFLRLRSAPPPPP 72


>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
          Length = 448

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 803 GGXKXGGXGGFXGGXPXFFYXGGG 732
           GG   GG GGF GG    F  GGG
Sbjct: 314 GGITGGGDGGFPGGGGGGFSGGGG 337


>01_06_1678 -
           39095986-39096205,39096400-39096477,39096578-39096949,
           39097374-39097671,39097867-39098077,39098331-39099023
          Length = 623

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 733 PPPX*KNXGXPPXNPPXPPXFXPP 804
           PPP       PP +PP PP   PP
Sbjct: 121 PPPPPHPPEDPPPHPPHPPDHPPP 144


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,145,810
Number of Sequences: 37544
Number of extensions: 333681
Number of successful extensions: 1710
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)