Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_P12
(932 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 34 0.17
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.51
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.51
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.51
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.6
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 29 4.8
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 6.3
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 6.3
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 8.3
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 8.3
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 8.3
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +1
Query: 733 PPPX*KNXGXPPXNPPXPPXFXPPXXKKNXXXXXXRGRXXXPXPPGXXSP 882
PPP +N G PP PP P PP ++ P PP P
Sbjct: 41 PPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPPPPEPEP 90
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/71 (28%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Frame = +1
Query: 724 GXTPPPX*KNXGXPPX--NPPXPPXFXPPXXKKNXXXXXXRGRXXXPXPPGXXSPXRXXX 897
G PPP PP +PP PP PP R P PP SP
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 312
Query: 898 XXXXXXXAHPP 930
+ PP
Sbjct: 313 PPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/71 (28%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Frame = +1
Query: 724 GXTPPPX*KNXGXPPX--NPPXPPXFXPPXXKKNXXXXXXRGRXXXPXPPGXXSPXRXXX 897
G PPP PP +PP PP PP R P PP SP
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 333
Query: 898 XXXXXXXAHPP 930
+ PP
Sbjct: 334 PPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/71 (28%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Frame = +1
Query: 724 GXTPPPX*KNXGXPPX--NPPXPPXFXPPXXKKNXXXXXXRGRXXXPXPPGXXSPXRXXX 897
G PPP PP +PP PP PP R P PP SP
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 318
Query: 898 XXXXXXXAHPP 930
+ PP
Sbjct: 319 PPPQAGGSPPP 329
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Frame = +1
Query: 733 PPPX*KNXGXPPXN----PPXPPXFXPPXXKKNXXXXXXRGRXXXPXPPGXXSP 882
PPP G PP + PP PP P +G P PPG +P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Frame = +1
Query: 733 PPPX*KNXGXPPXN----PPXPPXFXPPXXKKNXXXXXXRGRXXXPXPPGXXSP 882
PPP G PP + PP PP P +G P PPG +P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Frame = +1
Query: 733 PPPX*KNXGXPPXN----PPXPPXFXPPXXKKNXXXXXXRGRXXXPXPPGXXSP 882
PPP G PP + PP PP P +G P PPG +P
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1
Query: 803 GGXKXGGXGGFXGGXPXFFYXGGG 732
GG GG GGF GG F+ G G
Sbjct: 81 GGGAGGGGGGFPGGLFSHFFGGAG 104
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 803 GGXKXGGXGGFXGGXPXFFYXGGG 732
GG GG GGF GG F GGG
Sbjct: 56 GGGGGGGGGGFGGGNGGFGGGGGG 79
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 803 GGXKXGGXGGFXGGXPXFFYXGGG 732
GG GG GGF GG F GGG
Sbjct: 56 GGGGGGGGGGFGGGNGGFGGGGGG 79
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 800 GXKXGGXGGFXGGXPXFFYXGGGVXP 723
G GG GG GG + Y GGG P
Sbjct: 313 GGGGGGGGGMGGGNRGYGYQGGGSNP 338
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -1
Query: 503 FXXGXGXGXPKXXPPXPGGGGXFFXXKXXPPPPXXG 396
+ G G P PP PGG G F PPPP G
Sbjct: 651 YGSGGGSSMPMPVPP-PGGLGGFMPPPP-PPPPMPG 684
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -1
Query: 503 FXXGXGXGXPKXXPPXPGGGGXFFXXKXXPPPPXXG 396
+ G G P PP PGG G F PPPP G
Sbjct: 651 YGSGGGSSMPMPVPP-PGGLGGFMPPPP-PPPPMPG 684
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 803 GGXKXGGXGGFXGGXPXFFYXGGGV 729
GG GG GG+ GG Y GGG+
Sbjct: 186 GGFGGGGMGGYGGGMGGGGYGGGGM 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,177,009
Number of Sequences: 27780
Number of extensions: 185539
Number of successful extensions: 872
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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