Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_P11
         (899 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   4.3  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   5.7  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   7.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 559 YFKILNTKRNQYLTLGVNTNGHGGHMAY 642
           Y++I N  RNQ   +  +T+G  G  AY
Sbjct: 906 YYEICNRIRNQRWIVNRDTSGATGPFAY 933


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 302 KMNCMEYAYQLWLQGSKXHCSRLLPRLSSDLYSQKTT 412
           K+N  E   Q+W +  +  C + L +  +   S+ TT
Sbjct: 163 KINLPESRVQVWFKNRRAKCRQQLQQQQNKSASRTTT 199


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 655 VDSFRTQWYLQPAKYDNDVLFFIYNREYSEAL 750
           +D+ R  W    AKYD D    +Y ++Y + +
Sbjct: 94  IDNKRDWWNELEAKYDKD---GVYRQKYKDVI 122


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 661 SFRTQWYLQPAKYDNDVLFFIYNREY 738
           ++R +W    AKYD D    IY ++Y
Sbjct: 106 NYRNEWNQLVAKYDPD---GIYRKQY 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,746
Number of Sequences: 336
Number of extensions: 3044
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)