Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_P09
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1005 + 33723743-33723946,33724035-33724256,33724789-337249...    55   7e-08
04_03_0111 - 11361954-11363510                                         32   0.53 
06_01_0080 + 644021-645463                                             30   2.1  
05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571           29   3.7  
04_03_0515 + 16698589-16701066                                         29   4.9  
05_05_0252 - 23621592-23621912,23621958-23622317,23622979-236230...    29   6.5  
01_06_1543 - 38138253-38138855,38139000-38139239                       29   6.5  
01_06_0663 - 30991390-30992340                                         29   6.5  

>01_06_1005 +
           33723743-33723946,33724035-33724256,33724789-33724901,
           33725581-33725950
          Length = 302

 Score = 55.2 bits (127), Expect = 7e-08
 Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 2/144 (1%)
 Frame = +1

Query: 121 IGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDG-LLRGELK 297
           +G++G+G +G   A L A+ G  V + D     ++ A++ I   L  L   G L +   +
Sbjct: 13  VGVIGAGQMGSGIAQLAAAAGCGVLLLDSDTAALSRAVDSISSSLRRLVAKGQLSQASCE 72

Query: 298 AS-EQFQCIKGSTDLETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXX 474
            S EQ +C+    +L    + A  V E + E+ D+KKK+F  LD +   + I        
Sbjct: 73  HSIEQIKCVSSVQEL----RDADLVIEAIVESEDIKKKLFVELDKITKPSAILASNTSSI 128

Query: 475 XXXXXXEGLKHKSQVIVSHPVNPP 546
                        QVI  H  NPP
Sbjct: 129 SITRLASATNRPCQVIGMHFFNPP 152


>04_03_0111 - 11361954-11363510
          Length = 518

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +2

Query: 503 NISLRSLFLIR*-IHLITYPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDXFV 679
           N+  + L ++R  +++ TYP+  ++ AP   PE AKKT  I+E + +QP      I    
Sbjct: 240 NLEPKGLSMLRQWLNVPTYPVGPLLRAPAPSPE-AKKTSPILEWLDEQPPGSVLYISFGS 298

Query: 680 LNRI 691
           L RI
Sbjct: 299 LYRI 302


>06_01_0080 + 644021-645463
          Length = 480

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 10/45 (22%), Positives = 27/45 (60%)
 Frame = +1

Query: 118 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQ 252
           +IG+ G  ++G++ A+  A  G+ ++VY+    ++ + ++  K +
Sbjct: 5   RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVQRAKVE 49


>05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571
          Length = 527

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
 Frame = +1

Query: 76  VASTVIMASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQL 255
           V+ST  +A     +K+ ++G+G IG     ++  +G +VTV +  +  +     +I+ Q 
Sbjct: 222 VSSTGALALSEIPKKLVVIGAGYIGLEMGSVWNRLGSEVTVVEFASDIVPSMDGEIRKQF 281

Query: 256 HTLENDGLLRGELKASEQFQCIKGS---TDLETAVKGAIFVQEC 378
             +     ++  LK         GS     +E A  G   V EC
Sbjct: 282 QRMLEKQKMKFMLKTKVVGVDTSGSGVKLTVEPAAGGEQSVLEC 325


>04_03_0515 + 16698589-16701066
          Length = 825

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 469 YLLNLIISCYRQLRCRDSGTPFF 401
           Y  N++I+CYR+ R  D G P F
Sbjct: 190 YTYNILINCYRRARRPDLGLPVF 212


>05_05_0252 -
           23621592-23621912,23621958-23622317,23622979-23623059,
           23623262-23623633
          Length = 377

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 569 IVPAPWTKPEVAKKTREIMEEIGQQPVSLT 658
           IVPAPW++P   K  + I+++ G+   + T
Sbjct: 282 IVPAPWSRPLSEKVIKAILKDNGETKTTTT 311


>01_06_1543 - 38138253-38138855,38139000-38139239
          Length = 280

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +2

Query: 575 PAPWTKPEVAKKTREIMEEIGQQPV 649
           PAP   P+VAKK +E++E+ G  PV
Sbjct: 84  PAPGA-PDVAKKAKELLEQAGFGPV 107


>01_06_0663 - 30991390-30992340
          Length = 316

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 118 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQ 219
           ++  VG+G++G+S A    + GY +TVY+  A +
Sbjct: 21  RVAWVGTGVMGQSMAGHLLAAGYALTVYNRTASK 54


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,107,611
Number of Sequences: 37544
Number of extensions: 453749
Number of successful extensions: 1107
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)