Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_P06
         (928 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    83   4e-18
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   7.8  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 82.6 bits (195), Expect = 4e-18
 Identities = 42/78 (53%), Positives = 54/78 (69%)
 Frame = +3

Query: 378 QNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGVLEANPELS 557
           + + FQ E+ ++M LIIN+ Y NKEIFLRELISN SDALDKIR  SLT+   L++  EL 
Sbjct: 11  ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTNPSRLDSGKELY 70

Query: 558 IRIKAEPDKRLLHIIDSG 611
           I+I    +   L IID+G
Sbjct: 71  IKIIPNKNDGTLTIIDTG 88



 Score = 45.6 bits (103), Expect = 6e-07
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = +1

Query: 613 VGMTRADLINNLGTIAKSGTADFLSKMQDG 702
           +GMT+ADL++NLGTIAKSGT  F+  +Q G
Sbjct: 89  IGMTKADLVHNLGTIAKSGTKAFMEALQAG 118



 Score = 25.4 bits (53), Expect = 0.63
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +2

Query: 734 MIGPFGVGFYS 766
           MIG FGVGFYS
Sbjct: 123 MIGQFGVGFYS 133


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 698 SCILDRKSAVPDLAMVPRLL 639
           +CI+DR +  PD   + R+L
Sbjct: 43  NCIMDRGACTPDADELKRVL 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,032
Number of Sequences: 336
Number of extensions: 2404
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25961683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)