Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_P06
(928 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 105 5e-23
04_01_0042 + 473912-474058,474208-474349,474442-476264 96 3e-20
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 96 4e-20
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 96 4e-20
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 96 4e-20
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 92 5e-19
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 87 1e-17
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 85 6e-17
01_06_1797 + 39941482-39941608,39942302-39942497,39942601-399428... 29 4.0
02_05_1011 + 33487670-33487958,33490794-33492100,33492541-334928... 28 9.2
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 105 bits (252), Expect = 5e-23
Identities = 60/119 (50%), Positives = 78/119 (65%), Gaps = 2/119 (1%)
Frame = +3
Query: 261 LGSSREGSRTDAEAVLREEEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKLIINSLY 440
+G G TD+E V RE E+IS K LR A+ + FQ EV+R+M +IINSLY
Sbjct: 74 IGGVPHGLSTDSEVVQREAESIS--------RKTLRSSAEKFEFQAEVSRLMDIIINSLY 125
Query: 441 RNKEIFLRELISNGSDALDKIRLMSLTDRGVLEA--NPELSIRIKAEPDKRLLHIIDSG 611
NK+IFLRELISN SDALDKIR ++LTD+ VL +L I+IK + +K++L I D G
Sbjct: 126 SNKDIFLRELISNASDALDKIRFLALTDKEVLGEGDTAKLEIQIKLDKEKKILSIRDRG 184
Score = 48.0 bits (109), Expect = 1e-05
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +1
Query: 613 VGMTRADLINNLGTIAKSGTADFLSKMQDG 702
+GMT+ DLI NLGTIAKSGT+ F+ KMQ G
Sbjct: 185 IGMTKEDLIKNLGTIAKSGTSAFVEKMQTG 214
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 96.3 bits (229), Expect = 3e-20
Identities = 46/78 (58%), Positives = 57/78 (73%)
Frame = +3
Query: 378 QNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGVLEANPELS 557
+ + FQ E+N+++ LIIN+ Y NKEIFLRELISN SDALDKIR SLTD+ L+A PEL
Sbjct: 13 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELF 72
Query: 558 IRIKAEPDKRLLHIIDSG 611
IR+ + L IIDSG
Sbjct: 73 IRLVPYKPSKTLSIIDSG 90
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/30 (63%), Positives = 26/30 (86%)
Frame = +1
Query: 613 VGMTRADLINNLGTIAKSGTADFLSKMQDG 702
VGMT++DL+NNLGTIA+SGT +F+ +Q G
Sbjct: 91 VGMTKSDLVNNLGTIARSGTKEFMEALQAG 120
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 95.9 bits (228), Expect = 4e-20
Identities = 46/83 (55%), Positives = 57/83 (68%)
Frame = +3
Query: 363 LRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGVLEA 542
+ + + FQ E+N+++ LIIN+ Y NKEIFLRELISN SDALDKIR SLTD+ L+A
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 60
Query: 543 NPELSIRIKAEPDKRLLHIIDSG 611
PEL I I + L IIDSG
Sbjct: 61 QPELFIHIVPDKASNTLSIIDSG 83
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +1
Query: 613 VGMTRADLINNLGTIAKSGTADFLSKMQDG 702
VGMT++DL+NNLGTIA+SGT +F+ + G
Sbjct: 84 VGMTKSDLVNNLGTIARSGTKEFMEALAAG 113
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 95.9 bits (228), Expect = 4e-20
Identities = 46/83 (55%), Positives = 57/83 (68%)
Frame = +3
Query: 363 LRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGVLEA 542
+ + + FQ E+N+++ LIIN+ Y NKEIFLRELISN SDALDKIR SLTD+ L+A
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 60
Query: 543 NPELSIRIKAEPDKRLLHIIDSG 611
PEL I I + L IIDSG
Sbjct: 61 QPELFIHIVPDKASNTLSIIDSG 83
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +1
Query: 613 VGMTRADLINNLGTIAKSGTADFLSKMQDG 702
VGMT++DL+NNLGTIA+SGT +F+ + G
Sbjct: 84 VGMTKSDLVNNLGTIARSGTKEFMEALAAG 113
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 95.9 bits (228), Expect = 4e-20
Identities = 46/83 (55%), Positives = 57/83 (68%)
Frame = +3
Query: 363 LRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGVLEA 542
+ + + FQ E+N+++ LIIN+ Y NKEIFLRELISN SDALDKIR SLTD+ L+A
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 60
Query: 543 NPELSIRIKAEPDKRLLHIIDSG 611
PEL I I + L IIDSG
Sbjct: 61 QPELFIHIVPDKASNTLSIIDSG 83
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +1
Query: 613 VGMTRADLINNLGTIAKSGTADFLSKMQDG 702
+GMT++DL+NNLGTIA+SGT +F+ + G
Sbjct: 84 IGMTKSDLVNNLGTIARSGTKEFMEALAAG 113
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 92.3 bits (219), Expect = 5e-19
Identities = 43/90 (47%), Positives = 62/90 (68%)
Frame = +3
Query: 342 SVAQMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLT 521
+VA+ E + + +Q EV+R+M LI++SLY +KE+FLREL+SN SDALDK+R + +T
Sbjct: 330 AVAEKAEETAEEEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLGVT 389
Query: 522 DRGVLEANPELSIRIKAEPDKRLLHIIDSG 611
D +L EL IRIK +PD + I D+G
Sbjct: 390 DSSLLADGGELEIRIKPDPDAGTITITDTG 419
Score = 34.3 bits (75), Expect = 0.14
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +1
Query: 613 VGMTRADLINNLGTIAKSGTADFLSKMQDGEKSAA 717
+GMT+ +L + LGTIA+SGT+ FL +++ + A
Sbjct: 420 IGMTKDELKDCLGTIAQSGTSKFLKALKENKDLGA 454
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 87.4 bits (207), Expect = 1e-17
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Frame = +3
Query: 279 GSRTDAEAVLREEEAISPDALSVAQMKELRDR--AQNYTFQTEVNRMMKLIINSLYRNKE 452
G+ A LRE + S A + D + + +Q EVNR+M LI++SLY NKE
Sbjct: 318 GTDNAASLKLREGSLVGRRYESSAAAVDSSDTPPVEKHEYQAEVNRLMDLIVHSLYSNKE 377
Query: 453 IFLRELISNGSDALDKIRLMSLTDRGVLEANPELSIRIKAEPDKRLLHIIDSG 611
+FLREL+SN SDALDK+R +S+TD +++ L IRI+ + + ++ I D+G
Sbjct: 378 VFLRELVSNASDALDKLRYLSVTDPDLIKDGAGLDIRIQTDKENGIITITDTG 430
Score = 41.5 bits (93), Expect = 0.001
Identities = 16/33 (48%), Positives = 27/33 (81%)
Frame = +1
Query: 613 VGMTRADLINNLGTIAKSGTADFLSKMQDGEKS 711
+GMTR +L+++LGTIA SGTA FL +++ +++
Sbjct: 431 IGMTRQELVDSLGTIASSGTAKFLKALKESQEA 463
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 85.4 bits (202), Expect = 6e-17
Identities = 39/77 (50%), Positives = 56/77 (72%)
Frame = +3
Query: 378 QNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGVLEANPELS 557
+ + +Q EV+R++ LI++SLY +KE+FLREL+SN SDALDK+R +S+TD VL EL
Sbjct: 83 EQFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTDSSVLSDGGELE 142
Query: 558 IRIKAEPDKRLLHIIDS 608
IRIK +P+ + I S
Sbjct: 143 IRIKPDPEAGTITITRS 159
Score = 34.3 bits (75), Expect = 0.14
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +1
Query: 613 VGMTRADLINNLGTIAKSGTADFLSKMQDGEKSAA 717
+GMT+ +L + LGTIA+SGT+ FL +++ + A
Sbjct: 170 IGMTKDELKDCLGTIAQSGTSKFLKALKENKDLGA 204
>01_06_1797 +
39941482-39941608,39942302-39942497,39942601-39942828,
39943157-39943388,39943476-39943583,39943696-39943968,
39944261-39944545
Length = 482
Score = 29.5 bits (63), Expect = 4.0
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 342 SVAQMKELRDRAQNYTFQTEVNRMMKLIINSLYR--NKEIFLRELISNGSDALDKIRLMS 515
SV Q+K R R Q ++ + NSL+ +++ + ++L+ GS L ++
Sbjct: 383 SVPQVKGHRLRGGPQMIQLSLDGKRIYVTNSLFSRWDEQFYGQDLVKKGSHML---QIDV 439
Query: 516 LTDRGVLEANPELSIRIKAEPD 581
T++G L NP + AEP+
Sbjct: 440 DTEKGGLSINPNFFVDFGAEPE 461
>02_05_1011 +
33487670-33487958,33490794-33492100,33492541-33492853,
33493190-33494247
Length = 988
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 120 TSKSRWMFLTPAMKHIWLFGLGVLLLSGW 206
TS S W+FL P +WL L +G+
Sbjct: 572 TSTSMWIFLQPLTTSLWLASLAFFCFTGF 600
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,541,747
Number of Sequences: 37544
Number of extensions: 320281
Number of successful extensions: 1065
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -