Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_P04
         (906 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr...    33   0.28 
Z78012-7|CAB01411.1|  284|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
            T16G12.5 protein.
          Length = 1142

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
 Frame = +1

Query: 49   SGDSCSPIREDVLKYPK*TTXXXXXXXXXXXNVHAFVKR-DA-PKEDNSINTLAESAKKT 222
            S   C P+   V    + TT            +  F K  DA P ED S N   + AKK 
Sbjct: 791  SAKMCLPMISTVFMLTQTTTRMHDVHIRSMEAMANFTKAADAFPSEDVSFNLAVDEAKKL 850

Query: 223  IEELREKVESALAP----ETVKKNFGTMVDSFNEFYKNLKPAE 339
            + +L+  V    AP     T ++ +   VD  NE+ + L   E
Sbjct: 851  LRDLKIDVNQVNAPTLPQRTDRQRYNQQVDVCNEWIEELHDDE 893


>Z78012-7|CAB01411.1|  284|Caenorhabditis elegans Hypothetical
           protein C52E4.7 protein.
          Length = 284

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = -2

Query: 167 SRLTNACTLARQIANKIISSVVHFGYLRTSSRIGLQESPLKILREFPIVS 18
           S++ NA  +   ++  IISS+ H  Y+R  S + L+   L+ L  FP +S
Sbjct: 199 SKVDNALIIVDSLSMMIISSLFHNVYIRNDSSVDLER--LRSLASFPSLS 246


>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +1

Query: 178 EDNSINTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 348
           E++S   L    K TI   +      L  +  K  FG ++D FN  + NL+ ++  K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180


>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +1

Query: 178 EDNSINTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 348
           E++S   L    K TI   +      L  +  K  FG ++D FN  + NL+ ++  K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,690,828
Number of Sequences: 27780
Number of extensions: 311417
Number of successful extensions: 776
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)