Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_P03
         (889 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456355-1|CAG30241.1|  276|Homo sapiens Em:AC006547.3 protein.        63   1e-09
BC041339-1|AAH41339.1|  276|Homo sapiens chromosome 22 open read...    61   6e-09
AK057461-1|BAB71498.1|  273|Homo sapiens protein ( Homo sapiens ...    58   3e-08
AK092484-1|BAC03902.1|  214|Homo sapiens protein ( Homo sapiens ...    50   1e-05

>CR456355-1|CAG30241.1|  276|Homo sapiens Em:AC006547.3 protein.
          Length = 276

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
 Frame = +1

Query: 109 MCILFV-YNGSYDADSDYSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXXT 285
           MCI+F  ++    + + Y LI+A NRDEFY RPS     W +N  I+            T
Sbjct: 1   MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT 60

Query: 286 WLAVSPLRKKMGVLLN-LPNTPKKNAKSRGKIVAEFVKSKKEAASYVQEMKSYFEECNNF 462
           WL +S  R K+  L N L       A+ RG++V  F+ +  ++ SY++++       N F
Sbjct: 61  WLGIS-TRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGF 119

Query: 463 IFVAMD 480
             +A D
Sbjct: 120 NLIAAD 125


>BC041339-1|AAH41339.1|  276|Homo sapiens chromosome 22 open reading
           frame 25 protein.
          Length = 276

 Score = 60.9 bits (141), Expect = 6e-09
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
 Frame = +1

Query: 109 MCILFV-YNGSYDADSDYSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXXT 285
           MCI+F  ++    + + Y LI+A NRDEFY RPS     W +N  I+            T
Sbjct: 1   MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT 60

Query: 286 WLAVSPLRKKMGVLLN-LPNTPKKNAKSRGKIVAEFVKSKKEAASYVQEMKSYFEECNNF 462
           WL +S  R K+  L N L       A+ RG++V  F+ +  ++ SY++++       N F
Sbjct: 61  WLGIS-TRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGF 119

Query: 463 IFVA 474
             +A
Sbjct: 120 NLIA 123


>AK057461-1|BAB71498.1|  273|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32899 fis, clone TESTI2005408, highly similar to
           SER/THR-RICH PROTEIN T10 IN DGCR REGION. ).
          Length = 273

 Score = 58.4 bits (135), Expect = 3e-08
 Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
 Frame = +1

Query: 148 DSDYSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXXTWLAVSPLRKKMGVL 327
           +  + LI+A NRDEFY RPS     W +N  I+            TWL +S  R K+  L
Sbjct: 20  EGSHRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGTWLGIS-TRGKLAAL 78

Query: 328 LN-LPNTPKKNAKSRGKIVAEFVKSKKEAASYVQEMKSYFEECNNFIFVAMD 480
            N L       A+ RG++V  F+ +  ++ SY++++       N F  +A D
Sbjct: 79  TNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFNLIAAD 130


>AK092484-1|BAC03902.1|  214|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35165 fis, clone PLACE6012028, highly similar to
           SER/THR-RICH PROTEIN T10 IN DGCR REGION. ).
          Length = 214

 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
 Frame = +1

Query: 109 MCILFV-YNGSYDADSDYSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXXT 285
           MCI+F  ++    + + Y LI+A NRDEFY RPS     W +N  I+            T
Sbjct: 1   MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT 60

Query: 286 WLAVSPLRKKMGVLLNLPNTPKKNAKSRGK 375
           WL +S  R K+  L N    P+ + ++RG+
Sbjct: 61  WLGIS-TRGKLAALTNYLQ-PQLDWQARGR 88


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,048,488
Number of Sequences: 237096
Number of extensions: 2234064
Number of successful extensions: 4318
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4318
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)