Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_P01
         (916 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0572 - 4044610-4044658,4044754-4044857,4044942-4044944           92   5e-19
02_05_1078 + 33946902-33946904,33947006-33947109,33947206-33947254     92   5e-19
02_05_1076 + 33932543-33932545,33932643-33932746,33932859-33932907     92   5e-19
01_06_0287 + 28224956-28225216,28225385-28225641,28225789-282258...    31   1.7  
11_06_0478 + 24073295-24074172,24074790-24075090                       29   6.8  

>06_01_0572 - 4044610-4044658,4044754-4044857,4044942-4044944
          Length = 51

 Score = 92.3 bits (219), Expect = 5e-19
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = -2

Query: 321 MSAHKTFIIKRKLAXKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 175
           M +HKTF IK+KLA K++QNRPIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 1   MPSHKTFQIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 49


>02_05_1078 + 33946902-33946904,33947006-33947109,33947206-33947254
          Length = 51

 Score = 92.3 bits (219), Expect = 5e-19
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = -2

Query: 321 MSAHKTFIIKRKLAXKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 175
           M +HKTF IK+KLA K++QNRPIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 1   MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 49


>02_05_1076 + 33932543-33932545,33932643-33932746,33932859-33932907
          Length = 51

 Score = 92.3 bits (219), Expect = 5e-19
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = -2

Query: 321 MSAHKTFIIKRKLAXKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 175
           M +HKTF IK+KLA K++QNRPIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 1   MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 49


>01_06_0287 +
           28224956-28225216,28225385-28225641,28225789-28225899,
           28225926-28226021,28226078-28226134,28226348-28226438,
           28226610-28226678,28227091-28227180,28227390-28227440,
           28227535-28227753,28228064-28228127,28228211-28228299
          Length = 484

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 664 TRCARSFGXRRAVSSSXQGXNXGYPPXIXGXPPGQ 768
           TR + SFG R   S + +G   GYPP + G PP +
Sbjct: 53  TRSSDSFGGRSRGSGAARG---GYPPPLRGNPPSR 84


>11_06_0478 + 24073295-24074172,24074790-24075090
          Length = 392

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -3

Query: 338 QLDCSKCRPIRRLLLSANWPKS*NKTDPFLSG*GCAQETLF 216
           QL C  C  +    LSA WP    K D F S  G  +E +F
Sbjct: 207 QLFCLMCWQVEYQYLSAEWPPPSYKIDAFSSRTGRWEERVF 247


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,675,508
Number of Sequences: 37544
Number of extensions: 327921
Number of successful extensions: 656
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)