Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_O22
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     30   2.9  
06_01_0048 + 436156-436406,436514-436693,436725-437133                 29   5.0  
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310...    29   6.6  
12_02_1188 + 26801833-26802225                                         28   8.7  
11_01_0500 + 3866752-3866799,3866854-3866898,3867398-3867679           28   8.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409...    28   8.7  
02_04_0076 - 19486360-19488723                                         28   8.7  

>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 637 SRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 518
           SRGK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 25  SRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>06_01_0048 + 436156-436406,436514-436693,436725-437133
          Length = 279

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 745 TYSVSYEKAPRFPKGRKGGQVSGKRQGRNRRAHEGASRGKR 623
           T++ S     R   G  GG+ +  RQGR RR  E A+  +R
Sbjct: 28  TFAESGHPLARVGAGGGGGRGAATRQGRRRRHDEAAATARR 68


>06_03_0766 -
           24425486-24426245,24430766-24430855,24430951-24431070,
           24431568-24431746,24432046-24432231,24432454-24432547,
           24432679-24432743,24433652-24433987
          Length = 609

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 829 PDKAQRXXXXXXSAHSPAWSGRPTPN*DTYSVSYEKAP 716
           PD+  R      S++ P W GR     DT+S ++E AP
Sbjct: 247 PDEIVRRIRVSVSSYDPNWQGRLLETYDTHSDAFEIAP 284


>12_02_1188 + 26801833-26802225
          Length = 130

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -1

Query: 730 YEKAPRFPKGRKGGQVSGKRQGRNRRAHEGASRG 629
           +  APR  +G  GG  SGKR      AHEG   G
Sbjct: 23  FSPAPR--RGGGGGGSSGKRSSSAAAAHEGVPEG 54


>11_01_0500 + 3866752-3866799,3866854-3866898,3867398-3867679
          Length = 124

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -1

Query: 706 KGRKGGQVSGKRQGRNRRAHEG 641
           KGR GG+V G+RQ     A EG
Sbjct: 76  KGRSGGRVKGERQSHPAGAREG 97


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 301 NESAN---ARGEAVCVLGALPLPRSLTRCAR 384
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>09_03_0218 +
           13539481-13540082,13540171-13540276,13540645-13540960,
           13541187-13541263,13541269-13541895,13542783-13543112,
           13543442-13543747,13543824-13543896,13544004-13544089,
           13544219-13544396,13545311-13545756
          Length = 1048

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 706 KGRKGGQVSGKRQGRNRRAHEGASR 632
           +GR+GG V G+ +GR R    G SR
Sbjct: 55  RGRRGGAVRGRGRGRGRCRGRGRSR 79


>02_04_0076 - 19486360-19488723
          Length = 787

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 776 SWAVCRTPRSTRPLRLIRYY 835
           +WA  R  RS  PLR+++YY
Sbjct: 354 NWATLRKSRSMLPLRMLKYY 373


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,043,881
Number of Sequences: 37544
Number of extensions: 549386
Number of successful extensions: 1855
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1853
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)