Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_O22
         (895 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    26   0.53 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   1.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   1.2  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   2.8  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   3.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.8  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   5.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.6  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    22   8.7  

>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 477 SHVLSCVIPLILWITVLPPLSELIPLAA 394
           S +LS V+ L+L   +LPP S ++PL A
Sbjct: 270 SILLSLVVFLLLVSKILPPTSLVLPLIA 297


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = +1

Query: 571 STLKSEVAKPDRTIKIPGVSPWKLPRALSCS---DPAAYRIPVRLFSPSGSVALSHSSRC 741
           S++  +VA   R   IP +SP    +ALS     D  A  +P   F     V +  S+  
Sbjct: 79  SSVSLQVANLLRLFHIPQISPASTAKALSDKTRFDYFARTVPPDTFQSIALVDVVKSANW 138

Query: 742 RYLSSV 759
            Y+S+V
Sbjct: 139 SYVSTV 144


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = +1

Query: 571 STLKSEVAKPDRTIKIPGVSPWKLPRALSCS---DPAAYRIPVRLFSPSGSVALSHSSRC 741
           S++  +VA   R   IP +SP    +ALS     D  A  +P   F     V +  S+  
Sbjct: 169 SSVSLQVANLLRLFHIPQISPASTAKALSDKTRFDYFARTVPPDTFQSIALVDVVKSANW 228

Query: 742 RYLSSV 759
            Y+S+V
Sbjct: 229 SYVSTV 234


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 498 GLLLAFCSHVL-SCVIPLILWITVLPPLSELIPL 400
           G  ++ CS +L S  +  +L   ++PP S  IPL
Sbjct: 278 GEKVSLCSSILLSLTVFFLLLAEIIPPTSLAIPL 311


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 615 DTRRFPLEAPSCALLFRPCR 674
           + R FP++  SC L+   C+
Sbjct: 165 ELRNFPMDRQSCPLILGSCK 184


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 759 VGRPLQAGLCAEPPXPPDRCALSGT 833
           +G P+  GL   P   PD+C    T
Sbjct: 317 IGSPIVLGLNNTPDRTPDQCLFYNT 341


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/29 (31%), Positives = 11/29 (37%)
 Frame = -3

Query: 572 DFCDARSGGRSLWKNASNAAFLRFLAFCW 486
           D C   SGG  LW+N      +      W
Sbjct: 343 DACQMDSGGPVLWQNPRTKRLVNIGIISW 371


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 784 CVPNPPXHPTAAPYPVLSSEST 849
           C P+PP  P   P  V+ + ++
Sbjct: 394 CTPSPPRGPGGVPTSVIQAATS 415


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 477 SHVLSCVIPLILWITVLPPLSELIPL 400
           S +LS  +  +L   ++PP S ++PL
Sbjct: 277 SILLSLTVFFLLLAEIIPPTSLVVPL 302


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,684
Number of Sequences: 438
Number of extensions: 5361
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)