Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_O19
(913 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.032
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.098
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 32 0.13
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.23
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.40
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.52
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.69
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.69
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 1.2
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.6
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 28 2.1
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 3.7
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 4.9
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 26 6.5
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.032
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 821 PPPXXXXPPXPXPXPPPPPPXXPPPXXP 904
PPP PP P P PP PPP P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 31.5 bits (68), Expect = 0.17
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +2
Query: 818 APPPXXXXPPXPXPXPPPPPPXXPP-PXXP 904
APP P P P PPPP PP P P
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
Score = 29.5 bits (63), Expect = 0.69
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 824 PPXXXXPPXPXPXPPPPPPXXPPP 895
P P P PPPPP PPP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPP 1717
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 824 PPXXXXPPXPXPXPPPPPPXXPPPXXP 904
PP PP P P PPP P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 806 RXXXAPPPXXXXPPXPXPXPPPPPPXXPPP 895
R A PP P P P PPP PP
Sbjct: 1693 RPQSAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 821 PPPXXXXPPXPXPXPPPPPPXXPPPXXP 904
PP P P PPPP P P P
Sbjct: 1717 PPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 26.2 bits (55), Expect = 6.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 551 PPNXPXXPXPPPXPPPXP 604
PP+ P P PP PP P
Sbjct: 1717 PPSAPPMPAGPPSAPPPP 1734
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.098
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 818 APPPXXXXPPXPXPXPPPPPPXXPPP 895
AP P PP P PPPPP PPP
Sbjct: 745 APAPIPVPPPAPIMGGPPPPP--PPP 768
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 6/30 (20%)
Frame = +2
Query: 821 PPPXXXXPPXPXPXP------PPPPPXXPP 892
P P PP P P P PPPPP PP
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 821 PPPXXXXPPXPXPXPPPPPPXXPPP 895
PPP P PPPPPP PPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPP--PPP 783
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 6/31 (19%)
Frame = +2
Query: 821 PPPXXXXPPXPXPXPPP------PPPXXPPP 895
PPP P P PPP PPP PPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.5 bits (63), Expect = 0.69
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Frame = +2
Query: 821 PPPXXXXPPXPXPXPPPPPPXXP----PPXXP 904
PPP P P P P P PP P PP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 29.1 bits (62), Expect = 0.92
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 579 PPPXPPXXPXPXPXXXXXXXXXXXXXXXXPXXXXAXRSPPXXRGXXPPPPP 731
PPP PP P P P PP G PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP---PPGVAGAGPPPPP 779
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 816 PXPXPSXPPXXXRXPXPPPXPP 881
P P P P P PPP PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 816 PXPXPSXPPXXXRXPXPPPXPP 881
P P P PP PPP PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPP 767
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 551 PPNXPXXPXPPPXPPP 598
PP P PPP PPP
Sbjct: 752 PPPAPIMGGPPPPPPP 767
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 821 PPPXXXXPPXPXPXPPPPPPXXPPP 895
PP P P PPPPPP PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 25.8 bits (54), Expect(2) = 0.27
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 818 APPPXXXXPPXPXPXPPPPPP 880
A P P P PPPPPP
Sbjct: 176 AAAPATSLPSDYNPPPPPPPP 196
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 811 PXRXPXXXXXPXXPAPXXPPPXPPAAPXXS 900
P P P P PPP PP P S
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPPQS 250
Score = 23.4 bits (48), Expect(2) = 0.27
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 863 PPPPPPXXPPPXXP 904
P P PP PPP P
Sbjct: 234 PLPAPPPPPPPTLP 247
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +2
Query: 824 PPXXXXPPXPXPX--PPPPPPXXPPP 895
PP PP P P PP PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.23
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 845 PXPXPXPPPPPPXXPPPXXP 904
P P PPPPPP PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQP 24
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Frame = +2
Query: 842 PPXPXPXPPPP---PPXXPPPXXP 904
P P P PPPP PP PPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 30.3 bits (65), Expect = 0.40
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 842 PPXPXPXPPPPPPXXPPPXXP 904
PP P PPPPP PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPP 25
Score = 29.1 bits (62), Expect = 0.92
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 821 PPPXXXXPPXPXPXPPPP 874
PPP PP P PPPP
Sbjct: 13 PPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 821 PPPXXXXPPXPXPXPPPPP 877
PPP P P PPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 821 PPPXXXXPPXPXPXPPPPPPXXPP 892
PPP P P PPPPP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP--PP 30
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 827 PXXXXPPXPXPXPPPPPPXXPPPXXP 904
P PP P P PP PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 551 PPNXPXXPXPPPXPPPXPP 607
PP P PP PPP PP
Sbjct: 11 PPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 7/26 (26%)
Frame = +2
Query: 551 PPNXPXXPXPPPX-------PPPXPP 607
PP P P PPP PPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 903 GXXGGGXXGGGGGGXGXGXGGXXXXGG 823
G GGG G GGG G GG GG
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -2
Query: 903 GXXGG-GXXGGGGGGXGXGXGGXXXXGGGA 817
G GG G GG GG G GG GGA
Sbjct: 42 GARGGRGGRGGARGGRGGSSGGRGGAKGGA 71
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -2
Query: 903 GXXGGGXXGGGGGGXGXGXGGXXXXGGGAXXXR 805
G GG GG GG G G GG GG+ R
Sbjct: 33 GGARGGGRGGARGGRG-GRGGARGGRGGSSGGR 64
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.52
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Frame = +2
Query: 824 PPXXXXPPXPXPX---PPPPPPXXPPP 895
PP PP P P PP PPP PP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 29.5 bits (63), Expect = 0.69
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Frame = +2
Query: 821 PPPXXXXPPXPXP---XPPPPPPXXPPP 895
P P PP P P PP PPP PP
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 3/28 (10%)
Frame = +2
Query: 821 PPPXXXXPPXPXP---XPPPPPPXXPPP 895
P P PP P P PP P P PP
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = +2
Query: 821 PPPXXXXPPXPXP--XPPPPPPXXPPPXXP 904
P P PP P P PP P P P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = +2
Query: 821 PPPXXXXPPXPXP--XPPPPPPXXPPPXXP 904
P P PP P P PP P P P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = +2
Query: 821 PPPXXXXPPXPXP--XPPPPPPXXPPPXXP 904
P P PP P P PP P P P P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.5 bits (63), Expect = 0.69
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 891 GGXXGGGGGGXGXGXGGXXXXGGG 820
GG GG GGG G GG GGG
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = -2
Query: 903 GXXGG--GXXGGGGGGXGXGXGGXXXXGGG 820
G GG G GG GGG G GG GGG
Sbjct: 228 GGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 894 GGGXXGGGGGGXGXGXGGXXXXGG 823
G G GGG GG G GG GG
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGG 212
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -2
Query: 903 GXXGGGXX--GGGGGGXGXGXGGXXXXG 826
G GGG GGG GG G G GG G
Sbjct: 245 GGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 888 GXXGGGGGGXGXGXGGXXXXGGG 820
G GG GGG G GG GGG
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGG 243
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 606 GGXGGGXGGGXGXXGXLGG 550
GG GGG GG G G GG
Sbjct: 224 GGFGGGPGGFEGGPGGFGG 242
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 606 GGXGGGXGGGXGXXGXLGG 550
GG GGG GG G G GG
Sbjct: 238 GGFGGGPGGFGGGLGGFGG 256
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 606 GGXGGGXGGGXGXXGXLGG 550
GG GGG GG G G GG
Sbjct: 245 GGFGGGLGGFGGGPGGFGG 263
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 616 GXGXGXXGGXGGGXGXXGXVGW 551
G G GG GGG G G GW
Sbjct: 252 GGFGGGPGGFGGGPGGHGGPGW 273
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.69
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +2
Query: 818 APPPXXXXPPXPXPXPPPPPPXXP---PPXXP 904
APP PP P PPP P P PP P
Sbjct: 157 APPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 6/35 (17%)
Frame = +2
Query: 818 APPPXXXXPPXPXPXPP-----PP-PPXXPPPXXP 904
APP PP P PP PP P PPP P
Sbjct: 143 APPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 5/31 (16%)
Frame = +2
Query: 818 APPPXXXXPPXP-----XPXPPPPPPXXPPP 895
A PP PP P P PP P PPP
Sbjct: 122 AAPPSAPAPPTPQSELRPPTSAPPRPSIPPP 152
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -2
Query: 894 GGGXXGGGGG-GXGXGXGGXXXXGGGAXXXR 805
GGG GG GG G G GG GGG R
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGR 476
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 551 PPNXPXXPXPPPXPPPXP 604
PP P P PPP P P P
Sbjct: 467 PPLPPAAPAPPPAPAPAP 484
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 842 PPXPXPXPPPPPPXXPPPXXP 904
PP P P PPP P P P
Sbjct: 467 PPLPPAAPAPPPAPAPAPAAP 487
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 3/56 (5%)
Frame = +3
Query: 573 PXPPPXPPXXPXPXPXXXXXXXXXXXXXXXXPXXXXAXRS---PPXXRGXXPPPPP 731
P PPP P P P A S PP R PPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Frame = +2
Query: 821 PPPXXXXPPXP--XPXPPPPPPXXP-PPXXP 904
PP PP P P PP PP P PP P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +3
Query: 816 PXPXPSXPPXXXRXPXPPPXPPXXP 890
P P+ PP P PPP P P
Sbjct: 460 PAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 824 PPXXXXPPXPXPXPPPPPPXXPP 892
PP P P PP PP PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPP 437
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 821 PPPXXXXPPXPXPXPPPPPPXXPPP 895
PP PP P P P PPP
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 2/23 (8%)
Frame = +2
Query: 842 PPXPXPX--PPPPPPXXPPPXXP 904
PP P P PP PP PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPP 437
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = -1
Query: 595 GGXGGGXGXXGXVGWXTVFXSLIKXSKFAYNVLKTKTYKQFARLQLISQTLFSRVYFD-- 422
GG G G + + + F +N YK R+ + + + FD
Sbjct: 1885 GGSPIGPAGTGKTETVKAVSAYLGKNVFVFNCDNAFNYKTIQRILSGLAQIGTYICFDEF 1944
Query: 421 NKLEAGSSIALQFDVDEVKAQSSSGD 344
N+L++G+ A+ +D+ +++ S D
Sbjct: 1945 NRLDSGTLSAISYDIQRIQSLVSHSD 1970
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 805 PXPXRXPXXXXXPXXPAPXXPPPXPPAAPXXS 900
P P P P PAP P P +AP S
Sbjct: 423 PAPWAKPASSAAPSNPAPWQQPAAPQSAPALS 454
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 903 GXXGGGXXGGGGGGXGXGXGGXXXXG 826
G GG GG GGG G GG G
Sbjct: 152 GGFGGNSRGGFGGGSRGGFGGGSRGG 177
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = -2
Query: 903 GXXGGGXXGG-GGGGXGXGXGGXXXXGGGAXXXR 805
G GGG GG GGG G GG G R
Sbjct: 160 GGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRGR 193
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 818 APPPXXXXPPXPXPXPPPPPP 880
AP P P PPPPPP
Sbjct: 1082 APVANNVSKPSAVPPPPPPPP 1102
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,819,361
Number of Sequences: 5004
Number of extensions: 56837
Number of successful extensions: 656
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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