Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_O18
         (914 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81038-9|CAB02765.1|  189|Caenorhabditis elegans Hypothetical pr...    94   1e-19
AL032652-10|CAA21708.2|   92|Caenorhabditis elegans Hypothetical...    36   0.040
AF125956-5|AAD14722.2|  353|Caenorhabditis elegans Serpentine re...    29   6.1  
Z36753-4|CAA85333.1|  163|Caenorhabditis elegans Hypothetical pr...    28   8.1  
AL132952-7|CAB61139.2|  670|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z81038-9|CAB02765.1|  189|Caenorhabditis elegans Hypothetical
           protein C25A1.13 protein.
          Length = 189

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 49/122 (40%), Positives = 70/122 (57%)
 Frame = +2

Query: 143 SAFVRAPLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKP 322
           S F++ P  NG+ RY  QL RI  +FCK + +S G+R+FIE  LV+  + NP VV+Y +P
Sbjct: 27  SDFLKIPAYNGISRYTNQLHRITVRFCKQSESSVGVRNFIENQLVEIGRKNPSVVIYAQP 86

Query: 323 RRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSV 502
            R+  P I  EY NG  L ++  N T +E+ K V L  ++ G     +L   Q    PS+
Sbjct: 87  VRNSNPSIRAEYGNGRTLQINAKNMTQDEVSKDVHLLFSRSGEP-VVKLESRQSALVPSI 145

Query: 503 QG 508
           QG
Sbjct: 146 QG 147


>AL032652-10|CAA21708.2|   92|Caenorhabditis elegans Hypothetical
           protein Y63D3A.7 protein.
          Length = 92

 Score = 35.9 bits (79), Expect = 0.040
 Identities = 20/83 (24%), Positives = 37/83 (44%)
 Frame = +2

Query: 197 LQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPVIVGEYLNGDRL 376
           L+ I    C+ + AS G+R FIE D V   K NP   + ++      P +   Y +G   
Sbjct: 10  LREIRIHVCQKSPASAGVRAFIENDYVGIKKANPQFPILIREASGIVPRVFARYEHGVER 69

Query: 377 WMSVHNKTHEEIVKWVELFRTQQ 445
             ++ + + E +   +    +Q+
Sbjct: 70  VATLEDLSRENVKSTITQLASQK 92


>AF125956-5|AAD14722.2|  353|Caenorhabditis elegans Serpentine
           receptor, class h protein80 protein.
          Length = 353

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = -3

Query: 189 TYRPTPFFKGARTNADFKNRLLADIYFVFQPLH--LNSWVMLCYALHRFKXLREF 31
           ++ PT F     T A++ N+ L +++F+   LH  L+++V+L   +HR    REF
Sbjct: 271 SFLPTNFVVTTSTLAEYNNQALINLFFIHMSLHGLLSTFVIL--FIHR--PYREF 321


>Z36753-4|CAA85333.1|  163|Caenorhabditis elegans Hypothetical
           protein T09A5.5 protein.
          Length = 163

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +2

Query: 182 RYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYL-KPRRHRGPVIVGEY 358
           R+V     +   +  ++  + G+  F+E+ L    ++NP V  +L +      P +VGEY
Sbjct: 13  RFVPHFVALRLSWTHNDLKAEGLEQFVEECLPAIRENNPQVKYFLQRSYTTCDPFVVGEY 72

Query: 359 LNGDRLWMSVHNKTHEEIVKWVE 427
                    V+ K+ E+++  +E
Sbjct: 73  SWLRHRKKRVNWKSKEQVLSMIE 95


>AL132952-7|CAB61139.2|  670|Caenorhabditis elegans Hypothetical
           protein Y51H4A.7 protein.
          Length = 670

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +2

Query: 377 WMSVHNKTHEEIVKWVELFRTQQ 445
           W+ V++K  EEIV W++ +R ++
Sbjct: 284 WLDVYSKDLEEIVNWIKEYREKK 306


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,313,685
Number of Sequences: 27780
Number of extensions: 342093
Number of successful extensions: 847
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)