Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_O08
         (923 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            34   0.005
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.46 

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 34.3 bits (75), Expect = 0.005
 Identities = 24/85 (28%), Positives = 27/85 (31%), Gaps = 1/85 (1%)
 Frame = +2

Query: 554 GPPPXXXQXGPXPXRXGXGPPXNPPXXXGK-NXPXKXGXXPXKXLFXPXXPPSXPXX*XP 730
           GPP      G        GPP  PP      N P +    P   L  P  P +      P
Sbjct: 511 GPPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFP 570

Query: 731 PXWPRR*NPXXPPPPGXXPPKXTXP 805
             +P   N   PP P   PP    P
Sbjct: 571 AGFPNLPNAQPPPAPPPPPPMGPPP 595



 Score = 24.2 bits (50), Expect = 5.7
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = +2

Query: 521 PHPXGXXGXXLGPPPXXXQXGPXPXRXGXGPP 616
           P P       +GPPP     GP     G  PP
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 0.46
 Identities = 26/102 (25%), Positives = 29/102 (28%)
 Frame = +2

Query: 503 PXXKKGPHPXGXXGXXLGPPPXXXQXGPXPXRXGXGPPXNPPXXXGKNXPXKXGXXPXKX 682
           P    GP      G  +GPP       P P R G   P  P            G  P   
Sbjct: 183 PGMPPGPQMMRPPGN-VGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQ 241

Query: 683 LFXPXXPPSXPXX*XPPXWPRR*NPXXPPPPGXXPPKXTXPR 808
                 PPS      PP   +   P  PP P   P     P+
Sbjct: 242 PGMQPRPPSAQGMQRPPMMGQP-PPIRPPNPMGGPRPQISPQ 282



 Score = 27.1 bits (57), Expect = 0.80
 Identities = 22/85 (25%), Positives = 22/85 (25%), Gaps = 2/85 (2%)
 Frame = +2

Query: 557 PPPXXXQXGPXPXRXGXGPPXNPPXXXGKNXPXKXGXXPXKXLFXPXXPPSXPXX*XPPX 736
           PPP   Q  P         P  PP       P   G         P  P        PP 
Sbjct: 164 PPPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPG 223

Query: 737 WPRR*NPXXPP--PPGXXPPKXTXP 805
            P    P  PP   PG  P     P
Sbjct: 224 VPMPMRPQMPPGAVPGMQPGMQPRP 248



 Score = 25.4 bits (53), Expect = 2.5
 Identities = 18/68 (26%), Positives = 21/68 (30%)
 Frame = +2

Query: 449 PXXGXFXXXXGGGXXXVKPXXKKGPHPXGXXGXXLGPPPXXXQXGPXPXRXGXGPPXNPP 628
           P  G       G    ++P    G  P    G  + P P   Q    P   G  PP  PP
Sbjct: 212 PRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPG--MQPRPPSAQGMQRPPMMGQPPPIRPP 269

Query: 629 XXXGKNXP 652
              G   P
Sbjct: 270 NPMGGPRP 277


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,566
Number of Sequences: 2352
Number of extensions: 6380
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100468593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)