Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_O02
         (876 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.        32   3.1  
BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.        32   3.1  
AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.       32   3.1  
AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.           31   4.1  
BC063490-1|AAH63490.1|  241|Homo sapiens regulator of G-protein ...    30   9.6  
BC015614-1|AAH15614.2|  234|Homo sapiens RGS20 protein protein.        30   9.6  
AY046538-1|AAL03971.1|  388|Homo sapiens retina specific regulat...    30   9.6  
AF493940-1|AAM12654.1|  217|Homo sapiens regulator of G protein ...    30   9.6  
AF366057-1|AAK54125.1|  220|Homo sapiens RGS20 ret splice varian...    30   9.6  
AF366054-1|AAK54122.1|  273|Homo sapiens RGS20 ret splice varian...    30   9.6  
AF074979-1|AAC62013.1|  217|Homo sapiens regulator of G protein ...    30   9.6  
AF060877-1|AAC62009.2|  241|Homo sapiens Gz-selective GTPase-act...    30   9.6  

>BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.
          Length = 299

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -3

Query: 685 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 557
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.
          Length = 293

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -3

Query: 685 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 557
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.
          Length = 482

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -3

Query: 685 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 557
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.
          Length = 326

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +2

Query: 629 LVRSPVPTLPLTGYLSAFLPSGSVALSHS 715
           + R PV T+P+   L AF   GSV LSHS
Sbjct: 161 IFRGPVATIPIVLLLKAFPYCGSVVLSHS 189


>BC063490-1|AAH63490.1|  241|Homo sapiens regulator of G-protein
           signaling 20 protein.
          Length = 241

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = -2

Query: 866 CCQWDXSCLPGWTQDDSYPIRRSGRAEXGVRAHSPAWSERPTPN*D---TYSVSYEKAPR 696
           CC    SCL    Q+D  P   S      +RA  P W E P P  +    ++ S++K   
Sbjct: 66  CCCCSCSCLTVRNQEDQRPTIASHE----LRADLPTWEESPAPTLEEVNAWAQSFDKLMV 121

Query: 695 FPKG 684
            P G
Sbjct: 122 TPAG 125


>BC015614-1|AAH15614.2|  234|Homo sapiens RGS20 protein protein.
          Length = 234

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = -2

Query: 866 CCQWDXSCLPGWTQDDSYPIRRSGRAEXGVRAHSPAWSERPTPN*D---TYSVSYEKAPR 696
           CC    SCL    Q+D  P   S      +RA  P W E P P  +    ++ S++K   
Sbjct: 59  CCCCSCSCLTVRNQEDQRPTIASHE----LRADLPTWEESPAPTLEEVNAWAQSFDKLMV 114

Query: 695 FPKG 684
            P G
Sbjct: 115 TPAG 118


>AY046538-1|AAL03971.1|  388|Homo sapiens retina specific regulator
           of G-protein signaling splice variant 6 protein.
          Length = 388

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = -2

Query: 866 CCQWDXSCLPGWTQDDSYPIRRSGRAEXGVRAHSPAWSERPTPN*D---TYSVSYEKAPR 696
           CC    SCL    Q+D  P   S      +RA  P W E P P  +    ++ S++K   
Sbjct: 213 CCCCSCSCLTVRNQEDQRPTIASHE----LRADLPTWEESPAPTLEEVNAWAQSFDKLMV 268

Query: 695 FPKG 684
            P G
Sbjct: 269 TPAG 272


>AF493940-1|AAM12654.1|  217|Homo sapiens regulator of G protein
           signalling 20 protein.
          Length = 217

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = -2

Query: 866 CCQWDXSCLPGWTQDDSYPIRRSGRAEXGVRAHSPAWSERPTPN*D---TYSVSYEKAPR 696
           CC    SCL    Q+D  P   S      +RA  P W E P P  +    ++ S++K   
Sbjct: 42  CCCCSCSCLTVRNQEDQRPTIASHE----LRADLPTWEESPAPTLEEVNAWAQSFDKLMV 97

Query: 695 FPKG 684
            P G
Sbjct: 98  TPAG 101


>AF366057-1|AAK54125.1|  220|Homo sapiens RGS20 ret splice variant 4
           protein.
          Length = 220

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = -2

Query: 866 CCQWDXSCLPGWTQDDSYPIRRSGRAEXGVRAHSPAWSERPTPN*D---TYSVSYEKAPR 696
           CC    SCL    Q+D  P   S      +RA  P W E P P  +    ++ S++K   
Sbjct: 45  CCCCSCSCLTVRNQEDQRPTIASHE----LRADLPTWEESPAPTLEEVNAWAQSFDKLMV 100

Query: 695 FPKG 684
            P G
Sbjct: 101 TPAG 104


>AF366054-1|AAK54122.1|  273|Homo sapiens RGS20 ret splice variant 1
           protein.
          Length = 273

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = -2

Query: 866 CCQWDXSCLPGWTQDDSYPIRRSGRAEXGVRAHSPAWSERPTPN*D---TYSVSYEKAPR 696
           CC    SCL    Q+D  P   S      +RA  P W E P P  +    ++ S++K   
Sbjct: 98  CCCCSCSCLTVRNQEDQRPTIASHE----LRADLPTWEESPAPTLEEVNAWAQSFDKLMV 153

Query: 695 FPKG 684
            P G
Sbjct: 154 TPAG 157


>AF074979-1|AAC62013.1|  217|Homo sapiens regulator of G protein
           signaling protein.
          Length = 217

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = -2

Query: 866 CCQWDXSCLPGWTQDDSYPIRRSGRAEXGVRAHSPAWSERPTPN*D---TYSVSYEKAPR 696
           CC    SCL    Q+D  P   S      +RA  P W E P P  +    ++ S++K   
Sbjct: 42  CCCCSCSCLTVRNQEDQRPTIASHE----LRADLPTWEESPAPTLEEVNAWAQSFDKLMV 97

Query: 695 FPKG 684
            P G
Sbjct: 98  TPAG 101


>AF060877-1|AAC62009.2|  241|Homo sapiens Gz-selective
           GTPase-activating protein protein.
          Length = 241

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = -2

Query: 866 CCQWDXSCLPGWTQDDSYPIRRSGRAEXGVRAHSPAWSERPTPN*D---TYSVSYEKAPR 696
           CC    SCL    Q+D  P   S      +RA  P W E P P  +    ++ S++K   
Sbjct: 66  CCCCSCSCLTVRNQEDQRPTIASHE----LRADLPTWEESPAPTLEEVNAWAQSFDKLMV 121

Query: 695 FPKG 684
            P G
Sbjct: 122 TPAG 125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,591,853
Number of Sequences: 237096
Number of extensions: 2794622
Number of successful extensions: 17188
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17187
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)