Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_O01
         (887 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.17 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.6  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   6.5  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   8.6  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = +2

Query: 767 PXPXPXPXXXPXPPXSXXPGXPXXGXXLGPPP 862
           P P P P   P  P    P  P  G   G PP
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 167 CQSACKSCDIHCRKRLITRTIPMIFILXK 81
           C   C +CDI C  R++ R   M F + +
Sbjct: 474 CNKRC-NCDIDCINRVVQRGTKMQFCIFR 501


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +1

Query: 388 PY-SSDAAHHHPRTWKRAAARHF 453
           PY S+ AAHHH +  +  AA  F
Sbjct: 90  PYVSAAAAHHHHQQQQAVAAAAF 112


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 131 GSECRKIYKPIDKNANIDFINMEAGGARPV 220
           G  C++++     + + DFI +  G AR V
Sbjct: 53  GEPCQRVHSSRIPDLSYDFIVVGGGAARAV 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,622
Number of Sequences: 438
Number of extensions: 4518
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)