Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_N13
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 133 2e-31
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 133 2e-31
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 133 2e-31
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 133 2e-31
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 133 2e-31
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 126 3e-29
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 126 3e-29
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 90 2e-18
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 77 1e-14
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 68 1e-11
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 56 4e-08
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 44 1e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 39 0.005
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 38 0.007
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 38 0.013
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 36 0.029
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 36 0.051
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 36 0.051
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.089
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 33 0.27
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 4.4
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 4.4
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 78 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 154 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 230 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 306 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 130 bits (315), Expect = 1e-30
Identities = 64/69 (92%), Positives = 65/69 (94%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK L GK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 382 QIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 442 QKESTLHLV 450
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 233
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAG
Sbjct: 458 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 78 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 154 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 230 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 306 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 458 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 518 QKESTLHLV 526
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 534 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 593
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 594 QKESTLHLV 602
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 610 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 669
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 670 QKESTLHLV 678
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 686 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 745
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 746 QKESTLHLV 754
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 762 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 821
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 822 QKESTLHLV 830
Score = 130 bits (315), Expect = 1e-30
Identities = 64/69 (92%), Positives = 65/69 (94%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK L GK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 382 QIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 442 QKESTLHLV 450
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 78 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 154 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 230 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 306 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 382 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 442 QKESTLHLV 450
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 458 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 518 QKESTLHLV 526
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 534 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 593
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 594 QKESTLHLV 602
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 610 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 669
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 670 QKESTLHLV 678
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 686 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 745
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 746 QKESTLHLV 754
Score = 132 bits (318), Expect = 4e-31
Identities = 64/69 (92%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 762 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 821
Query: 276 QKESTLHLV 302
QK+STLHLV
Sbjct: 822 QKQSTLHLV 830
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 133 bits (321), Expect = 2e-31
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 276 QKESTLHLV 302
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 126 bits (303), Expect = 3e-29
Identities = 64/147 (43%), Positives = 88/147 (59%)
Frame = +3
Query: 99 IFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 278
+FVK L + + LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 279 KESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECT 458
E+T+++ Y+TP LAVL++YK+DENGKI RLR+EC
Sbjct: 57 SEATIYVNLELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQ 116
Query: 459 GEQCGAGVFMAVMEDRHYCGKCHSTMV 539
CG GVFMA +RHYCG+CH T+V
Sbjct: 117 QPSCGGGVFMAQHANRHYCGRCHDTLV 143
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 126 bits (303), Expect = 3e-29
Identities = 64/147 (43%), Positives = 88/147 (59%)
Frame = +3
Query: 99 IFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 278
+FVK L + + LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 279 KESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECT 458
E+T+++ Y+TP LAVL++YK+DENGKI RLR+EC
Sbjct: 57 SEATIYVNLELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQ 116
Query: 459 GEQCGAGVFMAVMEDRHYCGKCHSTMV 539
CG GVFMA +RHYCG+CH T+V
Sbjct: 117 QPSCGGGVFMAQHANRHYCGRCHDTLV 143
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 90.2 bits (214), Expect = 2e-18
Identities = 40/68 (58%), Positives = 52/68 (76%)
Frame = +3
Query: 99 IFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 278
I VK LTGK I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY +
Sbjct: 3 IKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVL 62
Query: 279 KESTLHLV 302
S LHLV
Sbjct: 63 GGSVLHLV 70
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 77.4 bits (182), Expect = 1e-14
Identities = 35/71 (49%), Positives = 49/71 (69%)
Frame = +3
Query: 90 KXQIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 269
K + VK L GK I + ++ +DT+E +K K+Q+K G+PP+QQRLIF QLE+ R L Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219
Query: 270 NIQKESTLHLV 302
NI+ E +HLV
Sbjct: 220 NIRDEDIIHLV 230
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +3
Query: 114 LTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 293
+TG IT VE SD I+++ K+ + + P ++ +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 294 HL 299
L
Sbjct: 152 RL 153
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIP 203
QIFVK LTGK ITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 275
QIFVK L G ++ DT+ ++K I+ + IP + L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 276 QKESTL 293
QK ST+
Sbjct: 214 QKSSTI 219
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +3
Query: 96 QIFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE---DGRTLSD 266
+I+V+ G+ TL+ SDT+ +VKAKI +K I PN Q+L+ L+ D TL D
Sbjct: 104 RIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFD 162
Query: 267 YNIQKESTLHL 299
+ + STL L
Sbjct: 163 NSFENGSTLRL 173
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/61 (40%), Positives = 32/61 (52%)
Frame = +3
Query: 117 TGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLH 296
+G L V SDTI VK I + + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 297 L 299
L
Sbjct: 241 L 241
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 135 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 299
L V SDTI ++K +I + + R++ GK LED +L+ YNIQ+ + + L
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +3
Query: 135 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 293
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 37.5 bits (83), Expect = 0.013
Identities = 18/46 (39%), Positives = 30/46 (65%)
Frame = +3
Query: 99 IFVKXLTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 236
+FVK L + + LEV ++ + ++K KI+ EGIP +QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 36.3 bits (80), Expect = 0.029
Identities = 16/58 (27%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 123 KXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDYNIQKESTL 293
K I +E++ +T+ +K +I+ + + N+Q L+F G +L+D +T++D I ++ +
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKI 89
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 35.5 bits (78), Expect = 0.051
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = +3
Query: 114 LTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 293
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 294 HL 299
+L
Sbjct: 644 YL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 35.5 bits (78), Expect = 0.051
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = +3
Query: 114 LTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 293
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 294 HL 299
+L
Sbjct: 644 YL 645
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 34.7 bits (76), Expect = 0.089
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 114 LTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 269
+ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY
Sbjct: 150 MPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 114 LTGKXITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 293
L G I +E++ DTI V + G+ ++QRL+ K+L+ +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 306 STPGGGWIPSGYCSPRGYVHLPAAFQQ 226
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 306 STPGGGWIPSGYCSPRGYVHLPAAFQQ 226
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 306 STPGGGWIPSGYCSPRGYVHLPAAFQQ 226
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 306 STPGGGWIPSGYCSPRGYVHLPAAFQQ 226
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 306 STPGGGWIPSGYCSPRGYVHLPAAFQQ 226
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 306 STPGGGWIPSGYCSPRGYVHLPAAFQQ 226
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 306 STPGGGWIPSGYCSPRGYVHLPAAFQQ 226
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 306 STPGGGWIPSGYCSPRGYVHLPAAFQQ 226
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 306 STPGGGWIPSGYCSPRGYVHLPAAFQQ 226
S PGG +PSG +G +H+P A Q
Sbjct: 1350 SRPGGAPLPSGVQEQQGILHIPRASDQ 1376
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,296,339
Number of Sequences: 27780
Number of extensions: 248035
Number of successful extensions: 636
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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