Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_N08
         (887 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   3.7  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   3.7  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    23   3.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   3.7  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    22   8.6  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   8.6  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 565 DQEELRQYNEHFLIPRDIFQE*GKFQKQKISECT 666
           + E+ ++YNE  L   +I  E G F++  + E T
Sbjct: 55  EDEKPQRYNECILKQFNIVDESGNFKENIVQELT 88


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 565 DQEELRQYNEHFLIPRDIFQE*GKFQKQKISECT 666
           + E+ ++YNE  L   +I  E G F++  + E T
Sbjct: 55  EDEKPQRYNECILKQFNIVDESGNFKENIVQELT 88


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 272 KYRRPSDSSFENRRRAARSK 331
           KYR  S   F +RR   RSK
Sbjct: 291 KYRETSKERFRDRRERERSK 310


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +2

Query: 254 QCSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 361
           QC  C+K     ++   +RR   + +P  C  C ++
Sbjct: 121 QCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERA 156


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 795 VNNTYEYLHYXN*NGHFKILCIFMQNY 715
           ++N Y+Y +Y N N + K L  + +NY
Sbjct: 85  LSNNYKYSNYNNYNNYNKKL--YYKNY 109


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 795 VNNTYEYLHYXN*NGHFKILCIFMQNY 715
           ++N Y+Y +Y N N ++     +  NY
Sbjct: 318 LSNNYKYSNYNNYNNNYNNYNNYNNNY 344


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,383
Number of Sequences: 438
Number of extensions: 5747
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)