BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_N01
(889 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrom... 33 1.0
AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein. 33 1.0
AB051514-1|BAB21818.1| 1130|Homo sapiens KIAA1727 protein protein. 33 1.4
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 33 1.8
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 33 1.8
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 33 1.8
BC095481-1|AAH95481.1| 591|Homo sapiens enabled homolog (Drosop... 32 2.4
BC065238-1|AAH65238.1| 527|Homo sapiens ENAH protein protein. 32 2.4
AY345143-1|AAR04685.1| 570|Homo sapiens MENA protein. 32 2.4
AL591380-2|CAH71476.1| 570|Homo sapiens enabled homolog (Drosop... 32 2.4
AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog (Drosop... 32 2.4
AL356216-3|CAI22019.1| 570|Homo sapiens enabled homolog (Drosop... 32 2.4
AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog (Drosop... 32 2.4
AK096246-1|BAC04736.1| 467|Homo sapiens protein ( Homo sapiens ... 32 2.4
AF519769-1|AAQ08487.1| 591|Homo sapiens mena protein protein. 32 2.4
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 32 3.2
U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2 pr... 32 3.2
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 32 3.2
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 32 3.2
AF007192-1|AAC02270.1| 338|Homo sapiens intestinal mucin protein. 32 3.2
AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing regula... 32 3.2
AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellu... 31 4.2
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 31 5.6
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 31 5.6
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 31 5.6
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 31 5.6
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 31 7.4
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 31 7.4
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 31 7.4
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 31 7.4
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 31 7.4
AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein. 31 7.4
AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein. 30 9.8
>AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrome
protein family member 4 protein.
Length = 625
Score = 33.5 bits (73), Expect = 1.0
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +1
Query: 730 SXXPPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPPXG 864
S PP PP +P +PP P P P G P PPP G
Sbjct: 426 SHPPPAPP--LGSPPSSKPGFAPPPAPPPPPPPMIGIPPPPPPIG 468
>AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein.
Length = 496
Score = 33.5 bits (73), Expect = 1.0
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +1
Query: 730 SXXPPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPPXG 864
S PP PP +P +PP P P P G P PPP G
Sbjct: 297 SHPPPAPP--LGSPPSSKPGFAPPPAPPPPPPPMIGIPPPPPPIG 339
>AB051514-1|BAB21818.1| 1130|Homo sapiens KIAA1727 protein protein.
Length = 1130
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 739 PPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPP 858
PP PP C SPP P P P G+P PPP
Sbjct: 26 PPPPPSPPCSCSREECPSSPPPPPPPPLP---GEPPIPPP 62
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +1
Query: 730 SXXPPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPPXG 864
S PP PP +P +PP P P P G P PPP G
Sbjct: 298 SHPPPAPP--LGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVG 340
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +1
Query: 730 SXXPPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPPXG 864
S PP PP +P +PP P P P G P PPP G
Sbjct: 298 SHPPPAPP--LGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVG 340
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +1
Query: 730 SXXPPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPPXG 864
S PP PP +P +PP P P P G P PPP G
Sbjct: 298 SHPPPAPP--LGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVG 340
>BC095481-1|AAH95481.1| 591|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 591
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = +1
Query: 703 GGVXGFFLXSXXPPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPPXGXXRVXP 882
G V G PP PPG + P PP P P P P PPP +V P
Sbjct: 305 GIVLGPLAPPPPPPLPPGPAQASVALPPPPGPP--PPPPLPSTGPPPPPPPPPLPNQVPP 362
>BC065238-1|AAH65238.1| 527|Homo sapiens ENAH protein protein.
Length = 527
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = +1
Query: 703 GGVXGFFLXSXXPPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPPXGXXRVXP 882
G V G PP PPG + P PP P P P P PPP +V P
Sbjct: 262 GIVLGPLAPPPPPPLPPGPAQASVALPPPPGPP--PPPPLPSTGPPPPPPPPPLPNQVPP 319
>AY345143-1|AAR04685.1| 570|Homo sapiens MENA protein.
Length = 570
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = +1
Query: 703 GGVXGFFLXSXXPPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPPXGXXRVXP 882
G V G PP PPG + P PP P P P P PPP +V P
Sbjct: 305 GIVLGPLAPPPPPPLPPGPAQASVALPPPPGPP--PPPPLPSTGPPPPPPPPPLPNQVPP 362
>AL591380-2|CAH71476.1| 570|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 570
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = +1
Query: 703 GGVXGFFLXSXXPPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPPXGXXRVXP 882
G V G PP PPG + P PP P P P P PPP +V P
Sbjct: 305 GIVLGPLAPPPPPPLPPGPAQASVALPPPPGPP--PPPPLPSTGPPPPPPPPPLPNQVPP 362
>AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = +1
Query: 703 GGVXGFFLXSXXPPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPPXGXXRVXP 882
G V G PP PPG + P PP P P P P PPP +V P
Sbjct: 552 GIVLGPLAPPPPPPLPPGPAQASVALPPPPGPP--PPPPLPSTGPPPPPPPPPLPNQVPP 609
>AL356216-3|CAI22019.1| 570|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 570
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = +1
Query: 703 GGVXGFFLXSXXPPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPPXGXXRVXP 882
G V G PP PPG + P PP P P P P PPP +V P
Sbjct: 305 GIVLGPLAPPPPPPLPPGPAQASVALPPPPGPP--PPPPLPSTGPPPPPPPPPLPNQVPP 362
>AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = +1
Query: 703 GGVXGFFLXSXXPPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPPXGXXRVXP 882
G V G PP PPG + P PP P P P P PPP +V P
Sbjct: 552 GIVLGPLAPPPPPPLPPGPAQASVALPPPPGPP--PPPPLPSTGPPPPPPPPPLPNQVPP 609
>AK096246-1|BAC04736.1| 467|Homo sapiens protein ( Homo sapiens
cDNA FLJ38927 fis, clone NT2NE2012505, highly similar to
Gallus gallus mRNA for avena. ).
Length = 467
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = +1
Query: 703 GGVXGFFLXSXXPPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPPXGXXRVXP 882
G V G PP PPG + P PP P P P P PPP +V P
Sbjct: 202 GIVLGPLAPPPPPPLPPGPAQASVALPPPPGPP--PPPPLPSTGPPPPPPPPPLPNQVPP 259
>AF519769-1|AAQ08487.1| 591|Homo sapiens mena protein protein.
Length = 591
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = +1
Query: 703 GGVXGFFLXSXXPPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPPXGXXRVXP 882
G V G PP PPG + P PP P P P P PPP +V P
Sbjct: 305 GIVLGPLAPPPPPPLPPGPAQASVALPPPPGPP--PPPPLPSTGPPPPPPPPPLPNQVPP 362
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 778 GRPSXSPPMXPXXPRPFXXGDPAXPPPXG 864
G P + PM P P PF G P PP G
Sbjct: 507 GGPGPAGPMGPFNPGPFNQGPPGAPPHAG 535
>U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2
protein.
Length = 652
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 778 GRPSXSPPMXPXXPRPFXXGDPAXPPPXG 864
G P + PM P P PF G P PP G
Sbjct: 449 GGPGPAGPMGPFNPGPFNQGPPGAPPHAG 477
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.2
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 730 SXXPPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPP 858
S PP PP R PS +P P P P PPP
Sbjct: 296 SSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVEVPPPP 338
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 778 GRPSXSPPMXPXXPRPFXXGDPAXPPPXG 864
G P + PM P P PF G P PP G
Sbjct: 507 GGPGPAGPMGPFNPGPFNQGPPGAPPHAG 535
>AF007192-1|AAC02270.1| 338|Homo sapiens intestinal mucin protein.
Length = 338
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 137 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 304
WPT T ++L T +S +P T TN++ + T+P +T S P S
Sbjct: 179 WPTATNTLSSLTTNILSSTPVPSTERTTSHTTNINPVSTLVTTLP-TTITRSTPTS 233
>AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing
regulatory protein (FUSE binding protein 2) variant
protein.
Length = 384
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 778 GRPSXSPPMXPXXPRPFXXGDPAXPPPXG 864
G P + PM P P PF G P PP G
Sbjct: 325 GGPGPAGPMGPFNPGPFNQGPPGAPPHAG 353
>AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellular
receptor 1 protein.
Length = 359
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 155 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP---KADLTSSLP 298
T +TT RTS +P TTT+ T + ++ T TVP T+S+P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVP 186
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 143 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLA 316
T+ T T TT T++ +P TTT+ T T +STT + T T+S+P++ ++
Sbjct: 149 TVPTTTTVPTTTVPTTMSIPTTTTVPTTMT-VSTTTSVP-TTTSIPTTTSVPVTTTVS 204
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 134 LWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLT 286
L +L T T+ L+T++ P+T T M TN +T+ T PK + T
Sbjct: 417 LTTSLAPTLTSELSTSQAETSTPRTETTMSPLTNTTTSQGTTRCQPKCEWT 467
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 739 PPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPP 858
PP PP R PS +P P P P PPP
Sbjct: 299 PPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPP 338
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 739 PPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPP 858
PP PP R PS +P P P P PPP
Sbjct: 299 PPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPP 338
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 739 PPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPPP 858
PP PP R PS +P P P P PPP
Sbjct: 299 PPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPP 338
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1
Query: 739 PPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPP 855
PP PPG G P PP P P P PA PP
Sbjct: 382 PPPPPGA------GGPPMPPPPPPPPPPPSSGNGPAPPP 414
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +1
Query: 739 PPTPPGXXRXCXXGRPSXSPP----MXPXXPRPFXXGDPAXPPP 858
PPTP G G P PP P P P G P PPP
Sbjct: 353 PPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPP 396
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1
Query: 739 PPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPP 855
PP PPG G P PP P P P PA PP
Sbjct: 382 PPPPPGA------GGPPMPPPPPPPPPPPSSGNGPAPPP 414
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +1
Query: 739 PPTPPGXXRXCXXGRPSXSPP----MXPXXPRPFXXGDPAXPPP 858
PPTP G G P PP P P P G P PPP
Sbjct: 353 PPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPP 396
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1
Query: 739 PPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPP 855
PP PPG G P PP P P P PA PP
Sbjct: 382 PPPPPGA------GGPPMPPPPPPPPPPPSSGNGPAPPP 414
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +1
Query: 739 PPTPPGXXRXCXXGRPSXSPP----MXPXXPRPFXXGDPAXPPP 858
PPTP G G P PP P P P G P PPP
Sbjct: 353 PPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPP 396
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1
Query: 739 PPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPP 855
PP PPG G P PP P P P PA PP
Sbjct: 394 PPPPPGA------GGPPMPPPPPPPPPPPSSGNGPAPPP 426
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +1
Query: 739 PPTPPGXXRXCXXGRPSXSPP----MXPXXPRPFXXGDPAXPPP 858
PPTP G G P PP P P P G P PPP
Sbjct: 365 PPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPP 408
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1
Query: 739 PPTPPGXXRXCXXGRPSXSPPMXPXXPRPFXXGDPAXPP 855
PP PPG G P PP P P P PA PP
Sbjct: 382 PPPPPGA------GGPPMPPPPPPPPPPPSSGNGPAPPP 414
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +1
Query: 739 PPTPPGXXRXCXXGRPSXSPP----MXPXXPRPFXXGDPAXPPP 858
PPTP G G P PP P P P G P PPP
Sbjct: 353 PPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPP 396
>AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein.
Length = 1315
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +1
Query: 739 PPTPPGXXRXCXX-GRPSXSPPMXPXXPRPFXXGDPAXPPP 858
PP PPG GRP P P P P G P P P
Sbjct: 532 PPRPPGPQAPTSPNGRPMQGGPPPPPPPPPPPPGPPQMPMP 572
>AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein.
Length = 589
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 140 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 304
PT T ++L ++ +S ++P T + TNL+ + + T+P +T S P S
Sbjct: 400 PTANSTLSSLTSSILSSTLVPSTDMITSHTTNLTRSSPLLATLP-TTITRSTPTS 453
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,410,825
Number of Sequences: 237096
Number of extensions: 2386390
Number of successful extensions: 14726
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 12587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14315
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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