SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_M24
         (1280 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4A2S6 Cluster: Putative membrane protein precursor; n=...    36   2.3  
UniRef50_Q948Y7 Cluster: VMP3 protein; n=1; Volvox carteri f. na...    36   2.3  
UniRef50_UPI0000DB7674 Cluster: PREDICTED: hypothetical protein;...    35   3.9  
UniRef50_Q65553 Cluster: UL36; n=5; Varicellovirus|Rep: UL36 - B...    35   3.9  
UniRef50_Q010M7 Cluster: Predicted membrane protein; n=3; Eukary...    35   3.9  
UniRef50_Q9H6K5 Cluster: CDNA: FLJ22184 fis, clone HRC00983; n=6...    35   5.2  
UniRef50_Q9LIE8 Cluster: Similarity to cell wall-plasma membrane...    34   6.9  
UniRef50_Q3HTK5 Cluster: Pherophorin-C2 protein precursor; n=8; ...    34   6.9  
UniRef50_Q9FPQ6 Cluster: Vegetative cell wall protein gp1 precur...    34   6.9  
UniRef50_A7QW77 Cluster: Chromosome chr3 scaffold_199, whole gen...    34   9.1  

>UniRef50_Q4A2S6 Cluster: Putative membrane protein precursor; n=1;
            Emiliania huxleyi virus 86|Rep: Putative membrane protein
            precursor - Emiliania huxleyi virus 86
          Length = 430

 Score = 35.9 bits (79), Expect = 2.3
 Identities = 29/111 (26%), Positives = 34/111 (30%)
 Frame = +3

Query: 672  PPDPFHXXTXPSXAXRIXSXPLSPXPXXXXXXPXWSXLISXHRXSPXPTXPXLPTTXXGP 851
            PP P    + PS +    S P S  P         +   S    SP P+ P  P +   P
Sbjct: 85   PPPPMPPRSPPSPSPPSPSPPPSFPPSVPPPSNPPNVPPSIPSPSPVPSPPP-PPSPFAP 143

Query: 852  IPXSXPSXXXXXFPPXXXXXXXXXXPXNXXXPASXPPXXSXXXXXPLPYPH 1004
             P   P       PP          P       S PP  S     P P PH
Sbjct: 144  EPSPPPPMPPPPTPPPPSPSPPPLPPPPWSPDPSPPPPPSPYMPPPSPPPH 194



 Score = 34.3 bits (75), Expect = 6.9
 Identities = 32/118 (27%), Positives = 36/118 (30%), Gaps = 8/118 (6%)
 Frame = +3

Query: 672  PPDPFHXXTXPSXAXRIXSXPLSPXPXXXXXXPXWSXLISXH-----RXSPXPTXPXLPT 836
            PP P +     S    +   P SP P      P W   +S         SP P  P  P 
Sbjct: 33   PPPPSNPPPPLSPPPSLPPPPPSPPPPSPPSLPPWWPNVSPSPPPPTTPSPSPPPPMPPR 92

Query: 837  TXXGPIPXS---XPSXXXXXFPPXXXXXXXXXXPXNXXXPASXPPXXSXXXXXPLPYP 1001
            +   P P S    PS      PP          P     P S PP  S     P P P
Sbjct: 93   SPPSPSPPSPSPPPSFPPSVPPPSNPPNVPPSIPSPSPVP-SPPPPPSPFAPEPSPPP 149



 Score = 34.3 bits (75), Expect = 6.9
 Identities = 32/117 (27%), Positives = 35/117 (29%)
 Frame = +2

Query: 653  PAXAXXPSRPXPXXHXPVXSPXHXXXSXLSTPXSSXPXXXLVXXHLXPSXLXXPHSPXAS 832
            P     PS+P P    P   P     S  S P    P        L PS    P SP  S
Sbjct: 199  PPPPYPPSQPPPFSPPPSPPPFSPPPSPPSQPPQPPPV-------LPPSS--PPPSPVPS 249

Query: 833  HXTRRPHPXXXPVXXXXXLPPLXKILXPXLXPXESXXPXXXPPXTXXXXXXPPTIPP 1003
                 P P   P       PP  + + P   P     P   PP        PP  PP
Sbjct: 250  APPSAPPPTQPPPSPVPSTPPSPQPVSP---PPSPEPPLQPPPNVPYPYAPPPGSPP 303


>UniRef50_Q948Y7 Cluster: VMP3 protein; n=1; Volvox carteri f.
            nagariensis|Rep: VMP3 protein - Volvox carteri f.
            nagariensis
          Length = 687

 Score = 35.9 bits (79), Expect = 2.3
 Identities = 34/121 (28%), Positives = 38/121 (31%)
 Frame = +2

Query: 653  PAXAXXPSRPXPXXHXPVXSPXHXXXSXLSTPXSSXPXXXLVXXHLXPSXLXXPHSPXAS 832
            PA A  P+ P P    P  SP        S P  S P       +  P     P+ P  S
Sbjct: 563  PAWANLPTSPDPPSPNP-PSPDPPSPDPPSAPPPSPPPPSPPPPNPPPPSPPPPNPPPPS 621

Query: 833  HXTRRPHPXXXPVXXXXXLPPLXKILXPXLXPXESXXPXXXPPXTXXXXXXPPTIPPXXR 1012
                 P P   P       PP      P   P  S  P   PP +      PP  PP  R
Sbjct: 622  PPPPSPPPPSPPPPN----PP------PPSPPPPSPRPPTPPPPSPPPPRPPPRPPPTRR 671

Query: 1013 S 1015
            S
Sbjct: 672  S 672


>UniRef50_UPI0000DB7674 Cluster: PREDICTED: hypothetical protein; n=2;
            Eumetazoa|Rep: PREDICTED: hypothetical protein - Apis
            mellifera
          Length = 441

 Score = 35.1 bits (77), Expect = 3.9
 Identities = 25/91 (27%), Positives = 29/91 (31%)
 Frame = +2

Query: 812  PHSPXASHXTRRPHPXXXPVXXXXXLPPLXKILXPXLXPXESXXPXXXPPXTXXXXXXPP 991
            P SP +   TR P P   P+      PP   I  P   P         PP         P
Sbjct: 222  PPSPPSPPVTRPPSPPSPPITRPPS-PPSPPITRPPSPPSPPITRPPSPPSPPVTRPPSP 280

Query: 992  TIPPXXRSXSXLXHXLLXXPXLXXXLPPLXT 1084
              PP  R  S     +   P     LPP+ T
Sbjct: 281  PSPPVTRPPSPPSPPVTRPPSPPTYLPPVNT 311



 Score = 34.3 bits (75), Expect = 6.9
 Identities = 33/127 (25%), Positives = 37/127 (29%), Gaps = 3/127 (2%)
 Frame = +2

Query: 650  SPAXAXXPSRPXPXXHXPVXSPXHXXXSXLSTPXSSXPXXXLVXXHLXPSX-LXXPHSPX 826
            SP  +  P  P      P+  P     S L    S  P          P+     P SP 
Sbjct: 154  SPPTSRPPPTPYLPPSPPINRPSPPPSSYLPPSPSRPPSPQPPPTRPPPTGPTYLPPSPP 213

Query: 827  ASHX--TRRPHPXXXPVXXXXXLPPLXKILXPXLXPXESXXPXXXPPXTXXXXXXPPTIP 1000
             +H   TR P P   PV      PP   I  P   P         PP         P  P
Sbjct: 214  VTHPPITRPPSPPSPPVTRPPS-PPSPPITRPPSPPSPPITRPPSPPSPPITRPPSPPSP 272

Query: 1001 PXXRSXS 1021
            P  R  S
Sbjct: 273  PVTRPPS 279


>UniRef50_Q65553 Cluster: UL36; n=5; Varicellovirus|Rep: UL36 - Bovine
            herpesvirus 1
          Length = 3247

 Score = 35.1 bits (77), Expect = 3.9
 Identities = 28/99 (28%), Positives = 34/99 (34%), Gaps = 1/99 (1%)
 Frame = +2

Query: 794  PSXLXXPHSPXASHXTRRPHPXXXP-VXXXXXLPPLXKILXPXLXPXESXXPXXXPPXTX 970
            P+ L     P AS  +  P     P +     LPP    L P   P     P   PP   
Sbjct: 2595 PAALPWRRPPPASLVSAAPPVPPGPRLPPAPPLPPPAPPLPPPAPPLPPPAPPLPPPAPP 2654

Query: 971  XXXXXPPTIPPXXRSXSXLXHXLLXXPXLXXXLPPLXTP 1087
                 PP +PP   S + +    L  P L   L P  TP
Sbjct: 2655 LPPPAPP-LPPPAPSTAPVPAPPLPPPALTPALTPAPTP 2692


>UniRef50_Q010M7 Cluster: Predicted membrane protein; n=3;
            Eukaryota|Rep: Predicted membrane protein - Ostreococcus
            tauri
          Length = 1449

 Score = 35.1 bits (77), Expect = 3.9
 Identities = 35/139 (25%), Positives = 40/139 (28%)
 Frame = +2

Query: 671  PSRPXPXXHXPVXSPXHXXXSXLSTPXSSXPXXXLVXXHLXPSXLXXPHSPXASHXTRRP 850
            P  P P    P  SP          P  + P          PS    P SP     +  P
Sbjct: 791  PPPPLPPSPPPPPSPPPPPPPPSPPPPPNPPTPPSPPP--PPSPPPPPSSPPPPSPSPPP 848

Query: 851  HPXXXPVXXXXXLPPLXKILXPXLXPXESXXPXXXPPXTXXXXXXPPTIPPXXRSXSXLX 1030
             P   P       PP      P   P  S  P   PP +      PP  PP   S     
Sbjct: 849  SPPPAPSPPPPPNPPPAPTPPPPPSPPPSPPPSPPPPPSPP----PPPSPPPSPSPPPSS 904

Query: 1031 HXLLXXPXLXXXLPPLXTP 1087
            +  L  P      PPL +P
Sbjct: 905  NPPLSSPPPLSSPPPLSSP 923


>UniRef50_Q9H6K5 Cluster: CDNA: FLJ22184 fis, clone HRC00983; n=6;
            Eutheria|Rep: CDNA: FLJ22184 fis, clone HRC00983 - Homo
            sapiens (Human)
          Length = 616

 Score = 34.7 bits (76), Expect = 5.2
 Identities = 32/140 (22%), Positives = 40/140 (28%), Gaps = 4/140 (2%)
 Frame = +2

Query: 680  PXPXXHXPVXSPXHXXXSXLSTPXSSXPXXXLVXX-HLXPSX-LXXPHSPXASHXTRRPH 853
            P P    P   P     S  +TP S  P         + PS     P SP A+   + P 
Sbjct: 161  PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 220

Query: 854  PXXXPVXXXXXLPPLXKILXPXLXPXESXXPXXXPPXTXXXXXXPPTIP--PXXRSXSXL 1027
            P   P       PP    + P   P     P    P        P ++P  P  +     
Sbjct: 221  PLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQA 280

Query: 1028 XHXLLXXPXLXXXLPPLXTP 1087
               L   P      PP   P
Sbjct: 281  PPALATPPLQALPSPPASFP 300


>UniRef50_Q9LIE8 Cluster: Similarity to cell wall-plasma membrane
            linker protein; n=9; Magnoliophyta|Rep: Similarity to
            cell wall-plasma membrane linker protein - Arabidopsis
            thaliana (Mouse-ear cress)
          Length = 1480

 Score = 34.3 bits (75), Expect = 6.9
 Identities = 35/146 (23%), Positives = 49/146 (33%), Gaps = 1/146 (0%)
 Frame = +2

Query: 653  PAXAXXPSRPXPXXHXPVXSPXHXXXSXLSTPXSSXPXXXLVXXHLXPSXLXXPHSPXAS 832
            P  A  P+   P    PV  P       ++TP ++ P          P  +  P  P A+
Sbjct: 433  PPVATPPTTTPPTATPPVAKPP-VETPPIATPPTAKPPISTPPISKPP--VATP--PAAT 487

Query: 833  HXTRRPHPXXXPVXXXXX-LPPLXKILXPXLXPXESXXPXXXPPXTXXXXXXPPTIPPXX 1009
                 P P   PV      +PP+ K   P + P  +  P   PP        PPT  P  
Sbjct: 488  PPITTPTPVKPPVATPPLAIPPVAK--PPVVTPPTATPPIATPPIAKSPVATPPTATPPV 545

Query: 1010 RSXSXLXHXLLXXPXLXXXLPPLXTP 1087
             +       ++  P      PP  TP
Sbjct: 546  ATPPIAKPPVVTPP---TTTPPTATP 568


>UniRef50_Q3HTK5 Cluster: Pherophorin-C2 protein precursor; n=8;
            Chlamydomonadales|Rep: Pherophorin-C2 protein precursor -
            Chlamydomonas reinhardtii
          Length = 853

 Score = 34.3 bits (75), Expect = 6.9
 Identities = 28/116 (24%), Positives = 30/116 (25%)
 Frame = +3

Query: 654  PXXXXXPPDPFHXXTXPSXAXRIXSXPLSPXPXXXXXXPXWSXLISXHRXSPXPTXPXLP 833
            P     PP P      P  +      P  P P      P      S    SP P  P  P
Sbjct: 269  PPPSPPPPPPPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPPPPSPPPPSPPPPSPPPP 328

Query: 834  TTXXGPIPXSXPSXXXXXFPPXXXXXXXXXXPXNXXXPASXPPXXSXXXXXPLPYP 1001
            +    P P   P       PP          P     P S PP        P P P
Sbjct: 329  SPPPPPPPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPPPPPPSPPP 384



 Score = 34.3 bits (75), Expect = 6.9
 Identities = 30/118 (25%), Positives = 32/118 (27%)
 Frame = +2

Query: 650  SPAXAXXPSRPXPXXHXPVXSPXHXXXSXLSTPXSSXPXXXLVXXHLXPSXLXXPHSPXA 829
            SP     PS P P    P   P          P S  P          PS    P  P  
Sbjct: 373  SPPPPPPPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSP-PPPSPPPP 431

Query: 830  SHXTRRPHPXXXPVXXXXXLPPLXKILXPXLXPXESXXPXXXPPXTXXXXXXPPTIPP 1003
               +  P P   P       PP      P   P  S  P   PP +      PP  PP
Sbjct: 432  PPPSPPPPPPPSPPPPPPPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPSPPPPSPP 489


>UniRef50_Q9FPQ6 Cluster: Vegetative cell wall protein gp1
           precursor; n=14; root|Rep: Vegetative cell wall protein
           gp1 precursor - Chlamydomonas reinhardtii
          Length = 555

 Score = 34.3 bits (75), Expect = 6.9
 Identities = 27/109 (24%), Positives = 33/109 (30%), Gaps = 1/109 (0%)
 Frame = +3

Query: 672 PPDPFHXXTXPSXAXRIXSXPLSPXPXXXXXXPXWSXLISXHRXSPXPTX-PXLPTTXXG 848
           PP P    + PS A    S P  P P      P      S    +P P   P  P     
Sbjct: 220 PPSPA-PPSPPSPAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRP 278

Query: 849 PIPXSXPSXXXXXFPPXXXXXXXXXXPXNXXXPASXPPXXSXXXXXPLP 995
           P P + P       PP          P +   P+  PP  +     P P
Sbjct: 279 PFPANTPMPPSPPSPPPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPAP 327


>UniRef50_A7QW77 Cluster: Chromosome chr3 scaffold_199, whole genome
            shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
            chr3 scaffold_199, whole genome shotgun sequence - Vitis
            vinifera (Grape)
          Length = 290

 Score = 33.9 bits (74), Expect = 9.1
 Identities = 29/119 (24%), Positives = 35/119 (29%), Gaps = 1/119 (0%)
 Frame = +2

Query: 650  SPAXAXXPSRPXPXXHXPVXSPXHXXXSXLSTPXSSXPXXXLVXXHLXPSXLXXPHSPX- 826
            +PA     +   P    P  SP     +  S P SS P          P     P +P  
Sbjct: 91   APAGGPTATPAPPTPTTPAASPP---TAVTSPPASSPPPVSAPPPATPPPATPPPATPPP 147

Query: 827  ASHXTRRPHPXXXPVXXXXXLPPLXKILXPXLXPXESXXPXXXPPXTXXXXXXPPTIPP 1003
            A+     P P   P        P      P   P  +  P   PP T      PP  PP
Sbjct: 148  ATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPP 206


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,185,202
Number of Sequences: 1657284
Number of extensions: 3128488
Number of successful extensions: 8130
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6732
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 130794573157
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -