Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_M24
         (1280 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0070 - 542603-542686,542803-543441                               31   1.5  
12_02_1174 - 26696869-26698191                                         30   4.5  

>01_01_0070 - 542603-542686,542803-543441
          Length = 240

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 15/64 (23%), Positives = 21/64 (32%)
 Frame = +2

Query: 812  PHSPXASHXTRRPHPXXXPVXXXXXLPPLXKILXPXLXPXESXXPXXXPPXTXXXXXXPP 991
            P +P     T  P P   P       P +  +  P   P ++  P   PP        PP
Sbjct: 49   PPAPATPAPTATPTPPVAPAKAPPVAPAVAPVTPPPPTPKKAPPPPVTPPPVTPPPVTPP 108

Query: 992  TIPP 1003
             + P
Sbjct: 109  PVSP 112


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 19/70 (27%), Positives = 21/70 (30%)
 Frame = +2

Query: 794  PSXLXXPHSPXASHXTRRPHPXXXPVXXXXXLPPLXKILXPXLXPXESXXPXXXPPXTXX 973
            P  L  P  P       RP     PV      PP          P  +  P   PP    
Sbjct: 149  PPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQP 208

Query: 974  XXXXPPTIPP 1003
                PPT+PP
Sbjct: 209  KPQPPPTLPP 218



 Score = 29.5 bits (63), Expect = 6.0
 Identities = 29/120 (24%), Positives = 33/120 (27%), Gaps = 3/120 (2%)
 Frame = +2

Query: 653  PAXAXXPSRPXPXXHXPVXSPXHXXXSXLSTPXSSXPXXXLVXXHLXPSXLXXPHSPXAS 832
            PA +  P  P P        P H        P  S P          P     P  P   
Sbjct: 117  PALSPVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPP-----PPPPPPPPRPPSVK 171

Query: 833  HXTRRPHPXXXPVXXXXXLPPLXKILXPXLXPXESXXPXXXPPXT---XXXXXXPPTIPP 1003
                +P P   P       PP      P + P     P   PP T         PPT+PP
Sbjct: 172  PPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKP-PVVQPKPQPPPTLPPPSPPPPPPTVPP 230


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,466,720
Number of Sequences: 37544
Number of extensions: 113059
Number of successful extensions: 230
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3980760984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)