Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_M24
         (1280 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK025837-1|BAB15254.1|  616|Homo sapiens protein ( Homo sapiens ...    35   0.73 

>AK025837-1|BAB15254.1|  616|Homo sapiens protein ( Homo sapiens cDNA:
            FLJ22184 fis, clone HRC00983. ).
          Length = 616

 Score = 34.7 bits (76), Expect = 0.73
 Identities = 32/140 (22%), Positives = 40/140 (28%), Gaps = 4/140 (2%)
 Frame = +2

Query: 680  PXPXXHXPVXSPXHXXXSXLSTPXSSXPXXXLVXX-HLXPSX-LXXPHSPXASHXTRRPH 853
            P P    P   P     S  +TP S  P         + PS     P SP A+   + P 
Sbjct: 161  PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 220

Query: 854  PXXXPVXXXXXLPPLXKILXPXLXPXESXXPXXXPPXTXXXXXXPPTIP--PXXRSXSXL 1027
            P   P       PP    + P   P     P    P        P ++P  P  +     
Sbjct: 221  PLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQA 280

Query: 1028 XHXLLXXPXLXXXLPPLXTP 1087
               L   P      PP   P
Sbjct: 281  PPALATPPLQALPSPPASFP 300


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,177,583
Number of Sequences: 237096
Number of extensions: 569935
Number of successful extensions: 1114
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18385440820
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)