Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_M24
         (1280 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    31   3.4  
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    30   7.8  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    30   7.8  

>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
            protein.
          Length = 926

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 27/91 (29%), Positives = 30/91 (32%), Gaps = 3/91 (3%)
 Frame = +2

Query: 812  PHSPXASHXTRRPH--PXXXPVXXXXXLPPLXKILXPXLXPXESXXPXXXPPXTXXXXXX 985
            P  P     TR P   P   P      LPP  K     L P  +  P   PP        
Sbjct: 186  PTRPPTRPPTRPPTRPPTRPPTPPPTYLPPTNK----PLPPVTTRLPPPPPPPRTPPPTR 241

Query: 986  PPTIPPXXR-SXSXLXHXLLXXPXLXXXLPP 1075
            PPT PP  R   + L       P +   LPP
Sbjct: 242  PPTRPPTTRPPATYLPPTNKPLPPVTTRLPP 272


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 19/68 (27%), Positives = 20/68 (29%)
 Frame = +3

Query: 654 PXXXXXPPDPFHXXTXPSXAXRIXSXPLSPXPXXXXXXPXWSXLISXHRXSPXPTXPXLP 833
           P     PP P      P+   R  S P  P P      P            P P  P  P
Sbjct: 326 PTYQPRPPAPPAPAPGPTYQPRPPSPPAPPAPTYQPQPPAPPAPAPGPTYQPRPPAPPAP 385

Query: 834 TTXXGPIP 857
           T   GP P
Sbjct: 386 TPEYGPPP 393


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 19/68 (27%), Positives = 20/68 (29%)
 Frame = +3

Query: 654 PXXXXXPPDPFHXXTXPSXAXRIXSXPLSPXPXXXXXXPXWSXLISXHRXSPXPTXPXLP 833
           P     PP P      P+   R  S P  P P      P            P P  P  P
Sbjct: 326 PTYQPRPPAPPAPAPGPTYQPRPPSPPAPPAPTYQPQPPAPPAPAPGPTYQPRPPAPPAP 385

Query: 834 TTXXGPIP 857
           T   GP P
Sbjct: 386 TPEYGPPP 393


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,004,148
Number of Sequences: 53049
Number of extensions: 170678
Number of successful extensions: 344
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6906482595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)