Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_M23
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0428 - 3127098-3129254                                           29   4.9  
05_04_0347 + 20479682-20479753,20480136-20480813,20481143-204821...    28   8.6  

>02_01_0428 - 3127098-3129254
          Length = 718

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +2

Query: 437 IPVHLPQLVKVMIRYTFDTAINVTVDAYMNLLNFTNFLTDVPLQSFAGLTISILI 601
           +PV L +L  +   + +D  +  TV  ++N LNF   L D+   SF G  +  LI
Sbjct: 454 MPVWLSKLKNLEKLFLYDNRLTGTVPVWINKLNFLICL-DISNNSFTGEILMTLI 507


>05_04_0347 +
           20479682-20479753,20480136-20480813,20481143-20482195,
           20482345-20482406,20482491-20482541,20482635-20482719,
           20483253-20483342,20483472-20483563,20483704-20483728
          Length = 735

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 261 YKKWSTVASLKLHTQFGKSSAKVEKLSSY 175
           ++KWS  A+ + H +FGK +  V K  +Y
Sbjct: 47  WEKWSVFANDRRHEEFGKFNGLVAKKKAY 75


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,606,160
Number of Sequences: 37544
Number of extensions: 239406
Number of successful extensions: 512
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)